Gene Rpic_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1417 
Symbol 
ID6287958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1506702 
End bp1507553 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID642624984 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001898990 
Protein GI187928503 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.583933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.169133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG TCACCCGAAC CACCTTGCCC GACGATGCGG TGTTGCCCGC TCGGTGGCGG 
GTGGCGTTGC TGGCACCGGC CGTTGCGCTG TTCTGCGCGT TCTGGCTGCT GCCGATGGCC
GCGCTGCTGC GTGTCAGCGG CAGCGAGGGC GTGATTGCCA CCTACACCGC AGCGCTGACC
ACGTCTCGCT ACCTCAGCAG CCTGTTTTCG ACGGTAATGC TGTCGGCGGC AGTCACGCTG
GCGACGCTCG TCCTCTCGAC CATCGCCGGG CTGTTTCTGG TGCGCCACAA CGTACCGGGA
AAGCAAATGA TTACCGCCAT GCTGACGTTT CCGCTGGCGT TTCCTGGTGT GGTGGTCGGC
TTCATGGTGA TCCTGCTGGC GGGGCGCCAG GGACTGCTGG GCGACGTCAC GCACAAGCTC
ATCGGTGAGA AATGGGTGTT CGCCTATTCC ATCGGCGGGC TGTTTCTCGG CTACCTGTAT
TTCTCGATTC CGCGCGTTGT GCTGACGGTG ATGGCGGCGG CGGAAAAGCT CGATCGTTCA
CTGGAAGAAG CGGCGCGCTC GCTCGGCGCA TCGTCGTGGC AGGTCACGCG CGATGTGCTG
GTGCCAGGGC TGGCGCCTGC GCTGATCGCC TCCGGCGCGA TCTGCTTTGC CACGTCGATG
GGCGCATTCG GCACCGCCTT CACGCTCGCC ACCGATATCG ACGTCTTGCC GATGACGATC
TATACCGAGT TCACGCTCAA CGCGGGCATT GCGATGGCGG CAGCGCTGTC GGTGGTGCTG
GGCGTGGTGA CGTGGCTGGT GCTGGCGATT GCGCGCACCG CGAGTGGTAG CCCAAGTGGG
GCCGCAGCAT GA
 
Protein sequence
MSTVTRTTLP DDAVLPARWR VALLAPAVAL FCAFWLLPMA ALLRVSGSEG VIATYTAALT 
TSRYLSSLFS TVMLSAAVTL ATLVLSTIAG LFLVRHNVPG KQMITAMLTF PLAFPGVVVG
FMVILLAGRQ GLLGDVTHKL IGEKWVFAYS IGGLFLGYLY FSIPRVVLTV MAAAEKLDRS
LEEAARSLGA SSWQVTRDVL VPGLAPALIA SGAICFATSM GAFGTAFTLA TDIDVLPMTI
YTEFTLNAGI AMAAALSVVL GVVTWLVLAI ARTASGSPSG AAA