| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1406 |
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| Symbol | |
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| ID | 6288553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1495534 |
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| End bp | 1496745 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642624973 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001898979 |
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| Protein GI | 187928492 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.61061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCG GAATCTCCAC TGCCGCGTCA ATCGCGGCCC CGCGTGAACC GGCCTGGGGT
GCTGTCTTTG CAATGGCACT GGGCGTGTTC GGGCTGGTCA CGGCCGAATT CCTGCCTGCA
AGCCTGCTGA CGCCCATGGC GGAAAGCCTG GGCGTGACCG AAGGCGTGGC AGGGCAGGCC
GTCACGGCCA CGGCAACGGT TGCGCTGGTC ACCAGCTTGT TGACCGCCGC TGTCACGCGG
TCCATCGACC GGCGGCGCGT GCTGCTCGCA TTCTCGGTGC TGCTTGTGGC ATCCAATCTT
GCGGTGGCGT TTGCAACCAG CCTCACGACG ATCCTGATCG GCCGCGTTGT GCTTGGCATT
GCACTGGGCG GCTTCTGGAC CATGGCGACC GCCACCGCAA TGCGGCTCGT GCCACCGGCG
TTGGTGCCGC GGGCGCTATC GATCATCTTC AGCGGCGTGG CCGTCGCCAC GATTGCCGCC
GCGCCGCTGG GCAGCTACTT CGGCCACCTG ATCGGCTGGC GCAATGTGTT CCTGGCCTCA
GCGGGACTGG GAGTGATGGC GTTTGTGTCG CAGGTCTCGA CGCTGCCGTC GATGGCGCCA
AGTGGCACAA CGCGCCTGCG CACGCTGATC GACGTGCTGC GCCGTCCGAG CGTGGGCATC
GGGATGTTCG CGACGATCCT GGTGTTCACC GGGCACTTTG CGTTCTTCAC GTACCTGCGG
CCGTTCCTGG AGCAGGTGGC GGGCGTTGGC GTGAACGGGC TGTCGGCCAT CCTGTTGGGC
TACGGCATTG CCAACTTCGT CGGCACATCG TTGGCCGGCC GCGTGCTGGA ACACCGGCTG
CGCCCAATGC TGATCGCAAT GCCCGCGTTG ATGGTCGTGC TGGGCATCGC GCTCGTGGCG
CTGGGCCGCG CACCGGTCAT CGACGCTGTG CTGATCGCGC TGTGGGGCAT GGCGTTTGGC
GGCGTGCCGG TGGCGTGGTC GACATGGGTG ACGCGCACCG TGCCCGATGA AGCCGAAAGC
GCGGGTGGCC TGATTGTTGC AGCCGTACAG CTCGCGATCG CCACCGGCGC GGCAGCCGGT
GGCTTGGTGT TCGACGCGAA CGGCGCAGCT GGTGTGTTCA TTGGCGCCGC CGTGGTGCTG
GCCACTGCCG TCGCGACGAT CGTGACGGGC GTGCCGAAGC GCGTCGAGGT GGTGCCGGCG
ATGGCCGAGT GA
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| Protein sequence | MNPGISTAAS IAAPREPAWG AVFAMALGVF GLVTAEFLPA SLLTPMAESL GVTEGVAGQA
VTATATVALV TSLLTAAVTR SIDRRRVLLA FSVLLVASNL AVAFATSLTT ILIGRVVLGI
ALGGFWTMAT ATAMRLVPPA LVPRALSIIF SGVAVATIAA APLGSYFGHL IGWRNVFLAS
AGLGVMAFVS QVSTLPSMAP SGTTRLRTLI DVLRRPSVGI GMFATILVFT GHFAFFTYLR
PFLEQVAGVG VNGLSAILLG YGIANFVGTS LAGRVLEHRL RPMLIAMPAL MVVLGIALVA
LGRAPVIDAV LIALWGMAFG GVPVAWSTWV TRTVPDEAES AGGLIVAAVQ LAIATGAAAG
GLVFDANGAA GVFIGAAVVL ATAVATIVTG VPKRVEVVPA MAE
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