Gene Rpic_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1389 
Symbol 
ID6289825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1482848 
End bp1483945 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content61% 
IMG OID642624956 
Productreplication initiation factor 
Protein accessionYP_001898962 
Protein GI187928475 
COG category[L] Replication, recombination and repair 
COG ID[COG2946] Putative phage replication protein RstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0245511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.60169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTGG ATATGGCCAC CGGCGAGATT CTGGATGTTG AGGCGGAGGT GGGCGGCTGT 
GCGGGCGCGC GGAGCGCGCA CGGGCAGACG GACGCCTTCG CTTGCCCCCC GCTACTAACA
GGGGGGGAAA GTCCAAACGC AGGCAGGGCG GTGATCGACT GGCTGTCGTT CACCTTCACG
GAGTGGCATG AGTCGACCCT CATGTCGATG ATGCTGGACC TCCTGTCCAC CTGGTGCGGC
CGCACGGTTG GTGCCGAGCC CGCCAATGGC CGGCACGGCT TCAAGCAGTC GCAGCTCCTG
TACGTCTTCC ATGAACACAA GTTTGTCCCG GTCGGTGTCA TCGCCTGGGG CGGCGAGCAA
CAGCGGGGCA GGGCCTATGT CTCACTTAAC GGAACTTATT GCAGCCTCGT TGCTGACGAT
CTTTGGCCTG TTGTTCATTC GTGGGTGGCA TCTACTCGTG CATGTCTTAC TCGCGTTGAC
CTTGCTGCTG ATTTTGTTAA CGGCGAGTAC ACCATCGAAG ACGCGGTCGA GTGGTACCGA
GCTGGAGAGT TCAACGCCGG TGGTCGCATG CCCAAGCATT CATGCGAGGG CGATTGGCTC
CACGCCAATC CTATCGGCGG ACGCACGCTG TACGTGGGAA AGCGCGGCAA CGGCAAGTTC
TCCCGCCTTT ACGAGAAGGG CAAGCAGCTA GGCAACGTCG ATAGTCCCTG GATGCGCTTC
GAGTGTGAGC TCGGCAACCG CGATCGCGTC CTGCCCCACG ACATCATCAC GCGTCCCACG
GAGTACTTCG CGGGGCAATA CAAGGTGTGC GCACGCATCG TTGATGCAGC AGCTGCACGC
ATCCGCACAA CGAAGCTCGA AGGCGAGATC ACCATCGGCC GTCTTAAGGC CGCTGTGAAA
ACGTCCTACG GTCGCTTCTT TCACGTGCTT CGTCTCATGA CTCCCGATCA CGCCAGGCTG
GTCGATGAGC TCGCAGTCGA GGGCGTGCCC TCACGCCTGG CGAAGTTCGC GCTACACGAG
TTCCTCCACC CCAAAGCGTC AGAGACGCCA ACTGAAAAAG GAGCACCACC ATGGCACTCA
CCCAAACCTT CACTGTGA
 
Protein sequence
MRVDMATGEI LDVEAEVGGC AGARSAHGQT DAFACPPLLT GGESPNAGRA VIDWLSFTFT 
EWHESTLMSM MLDLLSTWCG RTVGAEPANG RHGFKQSQLL YVFHEHKFVP VGVIAWGGEQ
QRGRAYVSLN GTYCSLVADD LWPVVHSWVA STRACLTRVD LAADFVNGEY TIEDAVEWYR
AGEFNAGGRM PKHSCEGDWL HANPIGGRTL YVGKRGNGKF SRLYEKGKQL GNVDSPWMRF
ECELGNRDRV LPHDIITRPT EYFAGQYKVC ARIVDAAAAR IRTTKLEGEI TIGRLKAAVK
TSYGRFFHVL RLMTPDHARL VDELAVEGVP SRLAKFALHE FLHPKASETP TEKGAPPWHS
PKPSL