Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1383 |
Symbol | |
ID | 6288359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1480034 |
End bp | 1481371 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642624951 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001898957 |
Protein GI | 187928470 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.277441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.495047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCC AACAAGCGGT CGCTGCGGGC AAGCCCTGGC ATGCAGACCT GACCCCCACG CACTGGCGCG TGCTGACCGG CAGCTTTCTG GGCTGGATTT TCGACGGCTA CGAAGCCTTC GCGCTCGTCG TCGTGCTATT CCCGATGCTG CATTCGCTGC TCACACCCGC ACAGCTGGCG ACGCCGGCCC TCTACGCCGG CATCGTCATC GGCGTGACTC TGCTCGGCTG GGGGATCGGC GGCCTGGTGG GCGGCGTGAT GGCGGACTAT GTCGGGCGCA AGCGGATGAT GCTGTGGTCG ATCTTTCTGT ACGCGCTGTT CTCGGGCCTG ACCACGTTCT CGCAGACGTT CGTGCAGTTG TGCGCGCTGC GCTTCATCAC CGGTCTGGCG ATGGGCAGCG AATGGAGCAC GGGCATCTCC CTGCTTGCCG AAACCTGGCC GGAAAAGGCG CGCGCCAAGG GCGCCGGCTT CCTGCAATCC GGTTTTGGCT GGGGCACGCT GATTGCTGCG CTGATCTGGT TTGGTCTGTC GTCGTCGCTC CCGATGGGCC AGGAAACCTG GCGGCTGATG TTTGCCCTCG GCGCACTGCC CGCGTTCTTC GTGCTGTACA TCCGCCGCGG TGTCGAGGAG TCGGAAAAAT GGAAGCAGGC CGTGCGTGAA AAGCGCTGGA GCGCCACCGG CGCGGCAGGC AAGGGCGGCA GCGACAAGCG GCCCTTCACG CTGTCCCAGT TGTTCCGCGA ACCGGAGGCT CGTCGCCGTA CGTTCGTCAC GCTGCTGCTT TCGGTGGTCA CCACCGTCGG CTGGTGGGCG ATCTCGAGCT GGCTGCCGAC CTTCACCATC GGACTCGCCA AGGAACAAGG TCTGGCCAAC CCGGCCGGCT GGGGCTCGAA GATCACGATT CTTTACACGG TGGGCGCCAT TGTTGCCTAC ATGGCCGCCG GCTTCATCAT CGACGCCATT GGCCGCCGCC GCTTCCTGTT CCTGACGTTC CTGGGCTCAT TGGCGACGAC CTACGTGACC TACGCGATGA CGACCTCGGT TGAATCGATG TCCGTCGTCG CGCCCATCAA CGGCTTCTTC ACGCTGGGCT GCGCCTATGT GTGGATGGCG ATCTATCCGG CAGAGCTGTT CGGCTCGACC GTACGCTCGA CCGCGTGCAG TTTCGTCTTC AATGCTGCGC GCCTGATCGC CTGGGTGTTC CCGATCATCG CCGGCTCGTT GATCCACTCG TTCGGTGGCG TCGCCAATGC GGCACTGGCG CTTGGCTCTG TCTACGTCCT CGGGCTTGTA TTGCCGTGGT TCCTGCCGGA AACGCAGGGG GAAGGTCTAC CACACTAA
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Protein sequence | METQQAVAAG KPWHADLTPT HWRVLTGSFL GWIFDGYEAF ALVVVLFPML HSLLTPAQLA TPALYAGIVI GVTLLGWGIG GLVGGVMADY VGRKRMMLWS IFLYALFSGL TTFSQTFVQL CALRFITGLA MGSEWSTGIS LLAETWPEKA RAKGAGFLQS GFGWGTLIAA LIWFGLSSSL PMGQETWRLM FALGALPAFF VLYIRRGVEE SEKWKQAVRE KRWSATGAAG KGGSDKRPFT LSQLFREPEA RRRTFVTLLL SVVTTVGWWA ISSWLPTFTI GLAKEQGLAN PAGWGSKITI LYTVGAIVAY MAAGFIIDAI GRRRFLFLTF LGSLATTYVT YAMTTSVESM SVVAPINGFF TLGCAYVWMA IYPAELFGST VRSTACSFVF NAARLIAWVF PIIAGSLIHS FGGVANAALA LGSVYVLGLV LPWFLPETQG EGLPH
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