Gene Rpic_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1383 
Symbol 
ID6288359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1480034 
End bp1481371 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content64% 
IMG OID642624951 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001898957 
Protein GI187928470 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.277441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.495047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC AACAAGCGGT CGCTGCGGGC AAGCCCTGGC ATGCAGACCT GACCCCCACG 
CACTGGCGCG TGCTGACCGG CAGCTTTCTG GGCTGGATTT TCGACGGCTA CGAAGCCTTC
GCGCTCGTCG TCGTGCTATT CCCGATGCTG CATTCGCTGC TCACACCCGC ACAGCTGGCG
ACGCCGGCCC TCTACGCCGG CATCGTCATC GGCGTGACTC TGCTCGGCTG GGGGATCGGC
GGCCTGGTGG GCGGCGTGAT GGCGGACTAT GTCGGGCGCA AGCGGATGAT GCTGTGGTCG
ATCTTTCTGT ACGCGCTGTT CTCGGGCCTG ACCACGTTCT CGCAGACGTT CGTGCAGTTG
TGCGCGCTGC GCTTCATCAC CGGTCTGGCG ATGGGCAGCG AATGGAGCAC GGGCATCTCC
CTGCTTGCCG AAACCTGGCC GGAAAAGGCG CGCGCCAAGG GCGCCGGCTT CCTGCAATCC
GGTTTTGGCT GGGGCACGCT GATTGCTGCG CTGATCTGGT TTGGTCTGTC GTCGTCGCTC
CCGATGGGCC AGGAAACCTG GCGGCTGATG TTTGCCCTCG GCGCACTGCC CGCGTTCTTC
GTGCTGTACA TCCGCCGCGG TGTCGAGGAG TCGGAAAAAT GGAAGCAGGC CGTGCGTGAA
AAGCGCTGGA GCGCCACCGG CGCGGCAGGC AAGGGCGGCA GCGACAAGCG GCCCTTCACG
CTGTCCCAGT TGTTCCGCGA ACCGGAGGCT CGTCGCCGTA CGTTCGTCAC GCTGCTGCTT
TCGGTGGTCA CCACCGTCGG CTGGTGGGCG ATCTCGAGCT GGCTGCCGAC CTTCACCATC
GGACTCGCCA AGGAACAAGG TCTGGCCAAC CCGGCCGGCT GGGGCTCGAA GATCACGATT
CTTTACACGG TGGGCGCCAT TGTTGCCTAC ATGGCCGCCG GCTTCATCAT CGACGCCATT
GGCCGCCGCC GCTTCCTGTT CCTGACGTTC CTGGGCTCAT TGGCGACGAC CTACGTGACC
TACGCGATGA CGACCTCGGT TGAATCGATG TCCGTCGTCG CGCCCATCAA CGGCTTCTTC
ACGCTGGGCT GCGCCTATGT GTGGATGGCG ATCTATCCGG CAGAGCTGTT CGGCTCGACC
GTACGCTCGA CCGCGTGCAG TTTCGTCTTC AATGCTGCGC GCCTGATCGC CTGGGTGTTC
CCGATCATCG CCGGCTCGTT GATCCACTCG TTCGGTGGCG TCGCCAATGC GGCACTGGCG
CTTGGCTCTG TCTACGTCCT CGGGCTTGTA TTGCCGTGGT TCCTGCCGGA AACGCAGGGG
GAAGGTCTAC CACACTAA
 
Protein sequence
METQQAVAAG KPWHADLTPT HWRVLTGSFL GWIFDGYEAF ALVVVLFPML HSLLTPAQLA 
TPALYAGIVI GVTLLGWGIG GLVGGVMADY VGRKRMMLWS IFLYALFSGL TTFSQTFVQL
CALRFITGLA MGSEWSTGIS LLAETWPEKA RAKGAGFLQS GFGWGTLIAA LIWFGLSSSL
PMGQETWRLM FALGALPAFF VLYIRRGVEE SEKWKQAVRE KRWSATGAAG KGGSDKRPFT
LSQLFREPEA RRRTFVTLLL SVVTTVGWWA ISSWLPTFTI GLAKEQGLAN PAGWGSKITI
LYTVGAIVAY MAAGFIIDAI GRRRFLFLTF LGSLATTYVT YAMTTSVESM SVVAPINGFF
TLGCAYVWMA IYPAELFGST VRSTACSFVF NAARLIAWVF PIIAGSLIHS FGGVANAALA
LGSVYVLGLV LPWFLPETQG EGLPH