Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1381 |
Symbol | |
ID | 6286148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1477901 |
End bp | 1479343 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624949 |
Product | 3-isopropylmalate dehydratase, large subunit |
Protein accession | YP_001898955 |
Protein GI | 187928468 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.8068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.283608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCTC AGACCTTGTT CGCAAAGCTG TGGCAACGCC ACGCCGTGCG TGATACCGAC GATGGCCACA CGCTGCTTTA CATCGACCTG CATCTGGTCA ATGAAGTGAC CAGCCCGCAG GCGTTCGAAG GACTGCGCAT CAGCCGGTTG CACCCGTGGC GGCCCGCCTC AGTGCTGGCC ACCGAAGACC ATAACGTGCC GACCGCCAAC CGCGCCGCCG GCATTACCGA TGACATCGCG CGGCGTCAGG TCGAGGCGCT GCGCAGCAAC TGCGCGCGCT TCGGCATTAC CGAATACCCG ATGCAGGACG CGCGTCAGGG CATCCTGCAC GTGATCGGGC CGGAGCAGGG GGCCACGCTG CCAGGCATGA CGATCGTCTG CGGCGATTCG CATACCACCA CGCACGGCGC ATTCGCCACG CTGGCATTCG GTATCGGGAC GTCCGAAATC GAACACGTGC TGGCCACGCA ATGCCTGATC GTCAAAAAGA TGAAGACGAT GCGCGTGCTG GTGGAGGGCG ACCTGTCGCC CGGCGTGACT TCCAAGGACG TGGCGCTTGC GCTGATCGGC CGTATCGGCA CCGCGGGCGC CACCGGGTAT GCCATCGAAT TTGCCGGCTC GGCCATCTCT GCGATGAGCA TGGATGCACG CATGACCCTG TGCAACATGG TCATCGAAGC CGGAGCACGC TGCGGCATGG TCGCCGTGGA TGACAAAACC ATCAACTACC TTCGCGGGCG GGCGCGTGCG CCGCAGGGCG CGCAATGGGA CGCCGCGCAG GCGTACTGGC GCACGCTGCG CAGCGATGAA GGGGCGCAGT TCGATCGGAC TATCGCACTC GACGCGACCA CGATTCGCCC ACACGTCACC TGGGGCACCT CGCCCGAGAT GGTGGTCACC ATCGACGGCC GTGTGCCCGA CCCGGCCGAG GAAAGCGACC CCATCAAGCG GCAAGGCATC ACCCGGGCGC TTACCTACAT GGGACTCGAG CCGGGCACAC CGCTGCGCGA CATCGCACTC GACAAGATTT TCATCGGCTC GTGCACGAAT GCACGTATCG AAGATCTGCG TGCCGCGGCG CGTGTGGTGG CCGGCAAGCA CGTTGCGGCC AACATCGTGC AGGCGCTTGT GGTGCCGGGC TCCGGACTGG TCAAACGCCA GGCCGAGGCC GAAGGGCTCG ACCGCATCTT CGTCGATGCC GGTTTTGAAT GGCGCGACCC GGGGTGTTCG ATGTGCCTGG GCATGAACGA CGACCGCCTG CAGCCGGGCG AGCGCTGCGC GTCAACGTCC AATCGCAATT TTGAAGGGCG GCAGGGCGCT GGCGGGCGCA CCCATCTGGT CAGCCCGCCA ATGGCGGCTG CCGCAGCAAT CGCGGGGCAT TTCGTTGCCG TCAGCGAACT TGGCGCCGAT GTTTTGGGGA GGAACAACGA TGCAGGCTTT TGA
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Protein sequence | MTPQTLFAKL WQRHAVRDTD DGHTLLYIDL HLVNEVTSPQ AFEGLRISRL HPWRPASVLA TEDHNVPTAN RAAGITDDIA RRQVEALRSN CARFGITEYP MQDARQGILH VIGPEQGATL PGMTIVCGDS HTTTHGAFAT LAFGIGTSEI EHVLATQCLI VKKMKTMRVL VEGDLSPGVT SKDVALALIG RIGTAGATGY AIEFAGSAIS AMSMDARMTL CNMVIEAGAR CGMVAVDDKT INYLRGRARA PQGAQWDAAQ AYWRTLRSDE GAQFDRTIAL DATTIRPHVT WGTSPEMVVT IDGRVPDPAE ESDPIKRQGI TRALTYMGLE PGTPLRDIAL DKIFIGSCTN ARIEDLRAAA RVVAGKHVAA NIVQALVVPG SGLVKRQAEA EGLDRIFVDA GFEWRDPGCS MCLGMNDDRL QPGERCASTS NRNFEGRQGA GGRTHLVSPP MAAAAAIAGH FVAVSELGAD VLGRNNDAGF
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