| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1368 |
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| Symbol | |
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| ID | 6286960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1466055 |
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| End bp | 1467374 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624936 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001898942 |
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| Protein GI | 187928455 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00531865 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.175653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAGA TTGACCTGCA CGCAGTGGCC GACCACGCCC GGTTCGGCCG CTTCCATGCC
ATCACACTGT TCTGGTGCGC GCTCATCATC ATCTTTGACG GCTACGACCT TGCCATCGCG
GGCATTGCAC TGCCGTCCAT CATGAAGGAC ATGGGCGTCA CGCCCACCAG CGCCGGCTTC
ATGGTCAGCG CGGCACTGTT CGGCATGATG TTCGGCGCGA TCTTTCTGGG CACGATTGCG
GATCGTATCG GCCGCCGCTG GGCGATTGCC GTGTGCATCG TGCTGTTCAG CGTCTTTACG
GCGGCAGCGG GTTTCTCCAC GGACCCGGTC ACCTTCAGCG TGACGCGTTT CCTGGCGGGC
CTCGGTATCG GCGGTGTGAT GCCGAACGTC GTGGCGCAGA TGACGGAGTA CTCGCCGCGC
CGGGCGCGCA GCACGCTCGT CACGCTCATG TTCAGCGGCT ATTCGGTGGG CGGCATGCTG
GCGGCGCTGC TGGGCAAGGG TCTGCTGGAA CACTACGGCT GGCAATCGGT GTTCATCGCG
GCTGTGCTGC CCGTGCTGCT GGTGCCGGCG ATCCTGCGGT GGATGCCGGA ATCGATGCCG
TTCCTGCTGC GCACCGGCAA GCTCGATGCG GTGCGTGACA TCGTGCGCCG GCTCAACCCA
AACGATGCGC CTCAGCCAGG CGACACCTTC ATCCTGCCCG AAGCCGATCG CGGCAACGAA
GCGCCGCTGG GCAGGCTGTT CCAGGACGGA CGCGGCTTCA GCACGGCGAT GTTCTGGATT
GCCTTCTTCA TGTGCCTGTT CATGGTTTAC GCGCTCAGCT CGTGGCTGAC CAAGCTGATG
GCGTCGGCGG GCTACAGCCT GGGTTCGGCG CTCACCTTTG TGCTGGTGCT GAACTTCGGG
GCCATGCTCG GCGCCATCGG CGGCGGCTGG CTGGCTGATC GCTTCAACAT CAAATACGTG
CTGATGGCCA TGTATGCGCT GGCGGCGGTG TCGATCGCAT TGCTCGGCAT CAAGACTTCA
ACCGAGGCGC TGTACGTGCT GGTGGCCGTG GCCGGCGGCT GCACCATCGG CACGCAGATC
GTGACGTACG CCTATGCCGG GCAGTTCTAT CCGATGAGCA TCCGCTCCAC GGGCATCGGC
TGGGCATCGG GCGTCGGGCG CAGCGGGGCC ATCCTCGCTC CCATCGTCAT CGGCATGCTG
GTGGGGATGG CGCTACCGCT GCACCACAAC TTCTTCGCCA TGGCTGTGCC GGCGGTGATT
GCGACGATTG CCGTGGCGTT CATCAACCAC CAGCGGTCGG CCTCGGTCAT CGCGCGCTGA
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| Protein sequence | MRQIDLHAVA DHARFGRFHA ITLFWCALII IFDGYDLAIA GIALPSIMKD MGVTPTSAGF
MVSAALFGMM FGAIFLGTIA DRIGRRWAIA VCIVLFSVFT AAAGFSTDPV TFSVTRFLAG
LGIGGVMPNV VAQMTEYSPR RARSTLVTLM FSGYSVGGML AALLGKGLLE HYGWQSVFIA
AVLPVLLVPA ILRWMPESMP FLLRTGKLDA VRDIVRRLNP NDAPQPGDTF ILPEADRGNE
APLGRLFQDG RGFSTAMFWI AFFMCLFMVY ALSSWLTKLM ASAGYSLGSA LTFVLVLNFG
AMLGAIGGGW LADRFNIKYV LMAMYALAAV SIALLGIKTS TEALYVLVAV AGGCTIGTQI
VTYAYAGQFY PMSIRSTGIG WASGVGRSGA ILAPIVIGML VGMALPLHHN FFAMAVPAVI
ATIAVAFINH QRSASVIAR
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