| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1367 |
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| Symbol | benD |
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| ID | 6286959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1465172 |
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| End bp | 1465954 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642624935 |
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| Product | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase |
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| Protein accession | YP_001898941 |
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| Protein GI | 187928454 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0277428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.172629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC AACGATTTTC AGGCAAGGCC GTCGTGGTGA CGGGCGCAGC GCAGGGCATC
GGCCGTGGCG TGGCAGTGGC TGCGGCAGAA GAGGGGGCGC ACGTGCTGCT GGTGGACCGC
GCCGAACTCG TCCACGAAGT GCAGGCCGAG ATTGCGGCAG CGGGCGGCCA CGCCCACGCC
ACCACGGCTG ATCTCGAAAC CTACGCCGGT GCCCAGCATG CCGTGCAGAC TGCGCTTGGC
GCGTTCGGCC GCATCGACGT GCTCATCAAC AACGTCGGCG GCACCATCTG GGCCAAGCCG
TATCAGCACT ATGAAGAGGC GCAGATCGAG GCGGAGATCC GCCGTTCACT GTTTCCGACG
CTGTGGTGCT GCCGCGCGGT GCTGCCGCAC ATGGTCGAGC GCAAGCAGGG CGTGATCGTG
AACGTGTCGT CCATCGCTAC ACGCGGCATC TACCGGATTC CGTACTCGGC GGCCAAGGGC
GGCGTCAATG CGCTCACCGC GAGTCTGGCG TTGGAACATG CGGACGACAA CATTCGCGTC
AACGCCGTCG CCACGGGCGG CACGGAGGCA CCGCCGCGCA AGATCCCGCG CAACGCGGCG
CCCATGTCGG AGCAGGAAAC CGTCTGGTAC CAGGGCATCG TCGACCAGAC CCTCGCCAGC
AGCCTGATGC ACCGCTACGG CACGATCGAC GAGCAGGTGC GGGCGATCCT GTTCCTCGCG
TCAGATGAGG CCTCGTACAT CACCGGGACG GTACTGCCCG TCGGCGGCGG AGACCTGGGT
TGA
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| Protein sequence | MSTQRFSGKA VVVTGAAQGI GRGVAVAAAE EGAHVLLVDR AELVHEVQAE IAAAGGHAHA
TTADLETYAG AQHAVQTALG AFGRIDVLIN NVGGTIWAKP YQHYEEAQIE AEIRRSLFPT
LWCCRAVLPH MVERKQGVIV NVSSIATRGI YRIPYSAAKG GVNALTASLA LEHADDNIRV
NAVATGGTEA PPRKIPRNAA PMSEQETVWY QGIVDQTLAS SLMHRYGTID EQVRAILFLA
SDEASYITGT VLPVGGGDLG
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