Gene Rpic_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1366 
Symbol 
ID6286958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1464147 
End bp1465175 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content62% 
IMG OID642624934 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_001898940 
Protein GI187928453 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0161467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.193638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTT TCACAGTCGC ATTGAACTTC GAAGACGGCG TGACCCGCTT CATCGATTGC 
AAAGCGGGGG AGAAGGTGCT CGATGCCGCC TTCCGCGCCA AGATCAACCT GCCCATGGAT
TGCTCCGATG GCGTCTGCGG GACCTGCAAG TGCCGCGCCG AGAGCGGAAC CTACGACCTT
GGCGACGATT ACATTGAAGA CGCCCTGACC GAAGACGAGA AGAACACCGG CCTTGTGCTG
ACGTGCCAGA TGGTGCCGCA AAGCGATTGC GTGATCGCGG TGCCGACCTC GTCGACCGCC
TGCAAAACGG GGCAGAGCAC GTTCGGCGCA ACGGTGTCGA ACGTCGAGTT GCACAACGAT
GCCGCCGTGG TGCTCGAGCT GGACGTGGAT GCCACGGCGC CGGTGTTCCT GCCCGGCCAG
TACGTCAACA TCGGTGTGCC GGGAAGCGGC CAGCACCGCT CGTATTCGTT CTCCTCAGCG
CCCGGTGAAA CGAAGATCAG CTTTCTGATC AAGAAGATTC CCGGCGGCGT GATGAGCACC
TGGCTCGAAG CCGCAAAGCC GGGCGACAAG CTCGATTTGC AGGGGCCGCT GGGCAGCTTC
TACCTGCGTG ATGTGCAGCG GCCGCTGTTG TTCCTGGCCG GCGGCACCGG CCTTGCGCCG
TTCCTGTCGA TGCTCGAAGT GCTGGCGCGC AGCAACTCGC AGCAGCACGT GCATCTGATC
TACGGCGTGA CCCGTGATCT CGACCTGGTA CAGGTCGACG CGATCGATGC CTATGTGGCG
CGGTTGCCGA ACTTCAGCTA CGCCACCGTC GTCGCCGACG CCGCGTCGAA TCATCCGCGC
AAGGGTTGGG TGACGCAGCA CATTCCGGCC AACGCGCTGA ACGATGGCGA CGTTGATGTC
TACCTGTGCG GGCCGCCGCC GATGGTAGAC GCCGTGCGCA AGTACTTTGA CGACCAAGGC
GTGAAACCCA AGAGCTTCCA CTACGAGAAG TTCACGCCCA ATGCAGTACC GGAGGCGAAG
GCGGCATGA
 
Protein sequence
MSSFTVALNF EDGVTRFIDC KAGEKVLDAA FRAKINLPMD CSDGVCGTCK CRAESGTYDL 
GDDYIEDALT EDEKNTGLVL TCQMVPQSDC VIAVPTSSTA CKTGQSTFGA TVSNVELHND
AAVVLELDVD ATAPVFLPGQ YVNIGVPGSG QHRSYSFSSA PGETKISFLI KKIPGGVMST
WLEAAKPGDK LDLQGPLGSF YLRDVQRPLL FLAGGTGLAP FLSMLEVLAR SNSQQHVHLI
YGVTRDLDLV QVDAIDAYVA RLPNFSYATV VADAASNHPR KGWVTQHIPA NALNDGDVDV
YLCGPPPMVD AVRKYFDDQG VKPKSFHYEK FTPNAVPEAK AA