Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1363 |
Symbol | |
ID | 6287921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1461304 |
End bp | 1462239 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642624931 |
Product | catechol 1,2-dioxygenase |
Protein accession | YP_001898937 |
Protein GI | 187928450 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0971616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0619689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTGC GCGTATTCCA AACGAAAGAA GTGCAGGACC TGCTGAAGGC CGCTACCAAC CTGGATGGCA ACGAAGGTAA CGCCCGCCTG AAGCAGATCA CCCACCGCTT GCTGGCGGAC CTGTTCAAGG CCATCGACGA TCTCGACATC ACGCCGGATG AAGTCTGGGC CGGCATCAAC TATCTGAACA AGCTTGGCCA GGACGGAGAG GCTGCATTGC TGGCTGCCGG CGTGGGCCTG GAGAAGTATC TCGACATCCG CATGGACGCC GCCGATGAGG CGCTTGGTCT CAATGGCGGG ACGCCTCGCA CGATCGAAGG CCCGCTGTAC GTGGCGGGCG CAACGGTGCG CGATGGCGTG TCCCGCATCG ACGTTGATCC GGACCCCGCC GCAGGCCCGT TGATCATTCA CGGCACGGTA ACCGGCCAGG ACGGCAAGCC GGTCGCCGGC GCCTTGGTCG AGTGCTGGCA TGCGAATTCG AACGGCTTCT ACTCGCACTT TGACCCGACC GGCGAGCAGA GCCCGTTCAA CCTGCGCGGC GCGGTCCGGA CCGGTGCCGA CGGCAAATAC GAATTCCGCA CGCTCATGCC CGTGGGCTAC GGCTGCCCGC CAGCGGGTGC GACCCAGCAA CTGCTGAACG GACTGGCCCG CCATGGCAAC CGGCCGGCGC ACGTGCACTT CTTCGTCACG AGCGATGGCC ACCGCAAGCT GACGACGCAA TTCAACATCG AAGGCGACCC GCTGATCTGG GACGACTTTG CCTACGCCAC CCGTGAAGAA CTGATTCCGC ACGTGGTTGA TAAAACCGGC GGCGCCGCAT TCGACCTCAA GACCGATGCG TACAAGGACA TCGAATTCAA CGTCGTGCTG ACGCCGCTGG TGCAGGGCAA GGACAACCAG CGCGTGAACC GCCTGCGTGC TTCGGCCGAG GCCTGA
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Protein sequence | MNVRVFQTKE VQDLLKAATN LDGNEGNARL KQITHRLLAD LFKAIDDLDI TPDEVWAGIN YLNKLGQDGE AALLAAGVGL EKYLDIRMDA ADEALGLNGG TPRTIEGPLY VAGATVRDGV SRIDVDPDPA AGPLIIHGTV TGQDGKPVAG ALVECWHANS NGFYSHFDPT GEQSPFNLRG AVRTGADGKY EFRTLMPVGY GCPPAGATQQ LLNGLARHGN RPAHVHFFVT SDGHRKLTTQ FNIEGDPLIW DDFAYATREE LIPHVVDKTG GAAFDLKTDA YKDIEFNVVL TPLVQGKDNQ RVNRLRASAE A
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