Gene Rpic_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1362 
Symbol 
ID6287920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1460978 
End bp1461268 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content61% 
IMG OID642624930 
Productmuconolactone delta-isomerase 
Protein accessionYP_001898936 
Protein GI187928449 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4829] Muconolactone delta-isomerase 
TIGRFAM ID[TIGR03221] muconolactone delta-isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.12038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0794783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTCC ACGTCCGCAT GGATGTCCGC CTGCCGGCCG ACATGCCCGC CGATGTCGCC 
AACGAGATCA AGGCGCGCGA AAAGGCCTAC TCGCAAGATC TGCAGCGCAG CGGCAAGTGG
CGCCACATCT GGCGCTTGGT TGGCGAGTAC GCGAACTACA GCGTCTTCGA CGTGCAGAGC
AATGCTGAAC TGCACGACAT CCTGACGGCG CTGCCGCTGT TTCCGTACAT GGAGATTTCC
GTGACACCGC TGTGCCGTCA TCCGTCGTCA GTTCACAGCG ACGACGCTTG A
 
Protein sequence
MLFHVRMDVR LPADMPADVA NEIKAREKAY SQDLQRSGKW RHIWRLVGEY ANYSVFDVQS 
NAELHDILTA LPLFPYMEIS VTPLCRHPSS VHSDDA