| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1358 |
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| Symbol | |
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| ID | 6286157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1453843 |
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| End bp | 1455396 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624926 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001898932 |
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| Protein GI | 187928445 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0349421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC CAAGCACAGA CCACACGGTT TCTCCGCCGC CCGCAGTGCG CAACCCGGTT
GCCGAATCGA CCGTCGGCAG CCGGATGGAA TTGCGTATGG TAGGCATGGT GATCGGCTTG
GCGACGGGCG TGGACTACAT GTCCAACCTG ATGTTCTCAA TTGCCGGACC GCATATCGAA
GGCGGGGTGC TGGCGTCACA GGATGTCTAT CTCTGGGCCG TGACGGCGTA TGCAGCAGCG
GCAAGTCTGT CGATTCTGGT GATGGGCCGG CTGGCCGACC ACATGACCTA CCGCAGGCAC
ACGCTACTGT CGCTGCTGGT GTTTATTGTC GGCACGCTGA TGTGCGCGGC GGCCGAGGGC
GGAACGATGC TGATCGTCGG GCGGGCGGTG CAGGGGTTTG GCGGCGGCCC GATGCTGTCG
ACTTCGCGCA TCTTCGTGCA GCACAGCCCC GCGCACGAAC GCCGCACGAT GATGAAGGGC
ATGATCTACG GCATCTTCGG GCTGAGCTGC GTGTCGCCGA TGCTGTCGGC GGCGCTGACG
GAGCAATTCG GCTGGCGCGC CATCTTCGTC GCGCAGTTGC TGGTGGCCGT GGTGGTATGC
GGGCTGGTGG CGGCGTTTTA TCCGCATCCG AAGATGCACG AGCGCCAGGG CGATTTCGCC
TCGCTCGATT GGCCCTCAGC CATCGCATTT GGGCTGGCGG CGCTGATTGC GCTGCACGGC
TTTCAGCAGG CCCGCTTCAT TCATCCCGAT GGTTCGCCTG CCCAGGTGGT GCCGATCATT
GCGGTGGTGG CACTCATCAT CTGGGTCGGC ATTCGCCAGA CGGCCCACCC ATTGCCGTGG
GTGGACTTGC GGGCCACGCT GCAGCGGCGC TTCATGATGG GCATGGTGTT CTACGCCATC
TATTACATGT TTGCGAGCGC CTGGGGCTTT CTTTCGTCGA GCCTGCTGCA GAACGGTCTG
GGCTTTCGCT ACGAGACCAC CGCGCAGTTG ATGAGCCTGG GCGGGCTGGT GACGGTGGTG
CTCGGCATCC TGAACTTTCA ATTGACGAAC GTGTTGCCGA CCAAGCGCGT GCTGATCTCC
ATCGGCTTTG TGCTGATGGC GACAGCTCTG CTGTGGATGT CGCATGTGGC CATGCCAGGC
GCCTCGGTGG CGGCGGTGGT GCCGGGCTTC ATGATCGAAG GCATGGTGGG GGTGTTTGTG
GTGATCCAGG TGGCGGGACT GACCTACGTG GATTTGCCGG CCAAGGATTT CGGCCATGCC
TACCAGTTCA AGGGAATCAT GCGGGCTTGG GCGCAGGCCT TTGGGACGAT GGGGGCAACA
TTGTTGCTGC AGCGCGGACA GGCGCAGCAT CGCACCGATC TGGTGGGGCA CGTCAGCGCG
CTGACGCCGG CCTGGCAGTG GCCGCATCCG TTGCAGGGGT CGGAGTTGAT GCGGATCTCG
TTGGAGATTG ATCGGCAGGC GACGTTGCTG GCGGTGGGGG ATTTGTTCGC CTGGGGCGCG
GTGGTGGCGT TGGTTTGCGC GGGGGCGATC TGGTTGCAGC GGTCGTTGCG GTGA
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| Protein sequence | MNTPSTDHTV SPPPAVRNPV AESTVGSRME LRMVGMVIGL ATGVDYMSNL MFSIAGPHIE
GGVLASQDVY LWAVTAYAAA ASLSILVMGR LADHMTYRRH TLLSLLVFIV GTLMCAAAEG
GTMLIVGRAV QGFGGGPMLS TSRIFVQHSP AHERRTMMKG MIYGIFGLSC VSPMLSAALT
EQFGWRAIFV AQLLVAVVVC GLVAAFYPHP KMHERQGDFA SLDWPSAIAF GLAALIALHG
FQQARFIHPD GSPAQVVPII AVVALIIWVG IRQTAHPLPW VDLRATLQRR FMMGMVFYAI
YYMFASAWGF LSSSLLQNGL GFRYETTAQL MSLGGLVTVV LGILNFQLTN VLPTKRVLIS
IGFVLMATAL LWMSHVAMPG ASVAAVVPGF MIEGMVGVFV VIQVAGLTYV DLPAKDFGHA
YQFKGIMRAW AQAFGTMGAT LLLQRGQAQH RTDLVGHVSA LTPAWQWPHP LQGSELMRIS
LEIDRQATLL AVGDLFAWGA VVALVCAGAI WLQRSLR
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