| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1340 |
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| Symbol | |
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| ID | 6286083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1433694 |
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| End bp | 1435565 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642624909 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001898915 |
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| Protein GI | 187928428 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.250899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCAA GAATTGAAGA TTACGCGTTG ATTGGCGATT GTGAAACCGC GGCACTGGTT
TCGCGCGACG GCTCCATCGA TTGGCTGTGC TGGCCTCGGT TCGATTCAGG CGCCTGTTTT
GCCGCGCTGC TTGGCACGCC GGACCACGGC CGGTGGCGCA TCGCTCCGCA AGGCGAGGTC
CGCGCCACGC GCCGACGCTA CCTGCCTGGC ACGCTCGTGC TGGAGACCGT CTTCGAGACC
GACACCGGTT CCGCCAGCGT GACCGACCTG ATGACGGCCC GCTTGCCCGG CATCGCCGGC
GCACGGGACG ACACCTCTGA GCTCATCCGC ATCGTGCGCG GGCTCTCCGG CACCGTCGAA
ATGCGTATGG ACCTTACGCT GCGGTTCGAT TACGGCGCGT CTGTACCGTG GGTCAGCCGC
GTGTCCGAAG TCACGGGGGC GCCGCCTGAA GGCAGGTGCG ACATGCCCGA TTGCGTGCTC
CGGGCCGTGG CCGGGCCCAA CATGACGACA CTGCGCACCG CCGCCCCAAT CCGAGGCGAA
AATCTCTCCA CCGTAGCGGA TTTTTCCGTG AGCGAAAGCG AGGCGATGCC CTTCGTGCTG
ACGTATTCGC CGTCGCACCT GCCCTTGCCC GACTCCATCG ACGCGCTGGA GGCGCAGGTC
GACATCGAGG CACGTTGGCG CGCGTGGTCC GGCCGCTGTC ACGGCGCTGG CGAATGGACC
GAAGCAGTGG AACGCTCGCT CATCACCCTC AAGGCGCTGA CGTACCACCG CACCGGCGGC
GTCGTGGCCG CGCCAACAAC GTCGCTGCCC GAACAGCTCG GCGGGGTGCG CAACTGGGAC
TACCGCTACT GCTGGCTGCG CGACGCCACG CTCACGCTGC TCGCGCTCAT GAATGCGGGC
TACTACAACG AGGCACGCTC CTGGCGTGAA TGGCTCGAAC GCGCCATCGC CGGCAGCCCC
GCACAAGTGC AGATCATGTA CGGCATTGCC GGCGAACGGC GCCTGGGCGA GTGGACCGTC
CCCTGGCTGC CCGGCTACGA AGGCGCGCAG CCCGTACGCG TGGGCAATGC GGCCGCGCTG
CAGCTCCAGC TCGATGTGTA CGGCGAGTTG ATGGACGCCC TCTTCATCGC CCGCAAAGGC
GGCCTTGACG GGGACGATGC CTCCTGGCGC CTGCAGGTCG CGCTGATGAC CCATCTGGAG
AGCGTCTGGC AGACGCCCGA CGAAGGCATC TGGGAGATCC GCGGGCCCTC GCGCCATTTC
ACGCATTCCA AGGTCATGGC GTGGGTGGCG TTCGACCGCG CCGTCAAAAC CATCGAGCAA
TTCAATGTAG ACGGGCCCGT GGAGCGCTGG CGAGCCGTGC GCGACCGCAT CCACGCGGAG
GTCTGCGCCC ACGGCTACAA TGCCGCGCGT GGCTGCTTCG TGCAGAGCTA CGGCGGGCAC
GAGCTGGACG CTGCACTTCT CATGCTGCCG CTGGTGGGTT TTCTGCCGGC ATCCGACCCG
CGCATCCAGG GCACGGTCAA GGCCATCGAA GAAGACCTGC TCGTCGATGG CCTCGTGCGC
CGCTACCGCA CCGAAGCCGT GACCGACGGC CTGCCCCAGG GCGAGGGCGT GTTCCTGGCC
TGCAGCTTCT GGTATGTCGA CAACCTCGTC ATGCAAGGTC GCCAGGACGA AGCCCGCGCG
CTCTTCGCCA AGCTGCTGGC ACTGCGCAAC GACGTGGGCC TGCTGGCCGA GGAATACGAC
CCACGCGTGC AACGGCTCGT TGGCAACTTC CCGCAAGCGT TTTCGCATAT CGCGCTGGTC
AATTCCGCGC TGGCGCTATC CAAGGCGGCC GATCATGTCA GCCAGCGCAC TGGGGAACCC
CCGTGCAGCT GA
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| Protein sequence | MPSRIEDYAL IGDCETAALV SRDGSIDWLC WPRFDSGACF AALLGTPDHG RWRIAPQGEV
RATRRRYLPG TLVLETVFET DTGSASVTDL MTARLPGIAG ARDDTSELIR IVRGLSGTVE
MRMDLTLRFD YGASVPWVSR VSEVTGAPPE GRCDMPDCVL RAVAGPNMTT LRTAAPIRGE
NLSTVADFSV SESEAMPFVL TYSPSHLPLP DSIDALEAQV DIEARWRAWS GRCHGAGEWT
EAVERSLITL KALTYHRTGG VVAAPTTSLP EQLGGVRNWD YRYCWLRDAT LTLLALMNAG
YYNEARSWRE WLERAIAGSP AQVQIMYGIA GERRLGEWTV PWLPGYEGAQ PVRVGNAAAL
QLQLDVYGEL MDALFIARKG GLDGDDASWR LQVALMTHLE SVWQTPDEGI WEIRGPSRHF
THSKVMAWVA FDRAVKTIEQ FNVDGPVERW RAVRDRIHAE VCAHGYNAAR GCFVQSYGGH
ELDAALLMLP LVGFLPASDP RIQGTVKAIE EDLLVDGLVR RYRTEAVTDG LPQGEGVFLA
CSFWYVDNLV MQGRQDEARA LFAKLLALRN DVGLLAEEYD PRVQRLVGNF PQAFSHIALV
NSALALSKAA DHVSQRTGEP PCS
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