Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1335 |
Symbol | |
ID | 6287725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1428563 |
End bp | 1430110 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642624904 |
Product | succinate CoA transferase |
Protein accession | YP_001898910 |
Protein GI | 187928423 |
COG category | [C] Energy production and conversion |
COG ID | [COG0427] Acetyl-CoA hydrolase |
TIGRFAM ID | [TIGR03458] succinate CoA transferases |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.311322 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTG ATATTGGCGG CCGCATTCGC CTGCAATCCC TGCTGGACAA AGTGGTGTCT GCGGACGAAG CCGCGACCCT GATCCACGAT GGCATGACGG TCGGCATGAG CGGTTTCACC CGTGCCGGCG ACTGCAAGGC CGTGCCGTTT GCCCTGGCCC GGCGTGCCGC GCACGAGCCG CTGCGCATTA CCCTGATGAC CGGCGCCTCG CTGGGTAACG ACATTGACAA GGTATTGGCC GAAGCCGATG TGATTGCCCG TCGCCTGCCG TTCCAGGCCG ATGCCACCCT TCGGCGCAAG ATCAACGCAG GCGAGGTCAT GTTCATTGAC CAGCACTTGT CGGAAACCGT CGAGCAACTG CGTTCGCGGC AGATTGCACC GCTGGATGTG GCGGTTGTCG AAGCCACGGC CATCACCGAG AACGGCGGCA TCGTGCCGAC TACGTCGGTC GGTAATTCCG CAAGTTTCGC GGTGCTGGCG AAGCAGGTGA TCGTCGAGAT CAACCTGAAC ATGCCCGCCA ATCTGGAAGG GCTGCACGAT ATCTTCTTTC CGGTGCAGCG GCCCTATCGC CAGCCGATTC CACTCATTGC AGCGGAGCAG CGCATCGGCC TGCCGTCTAT CCCGATCGAT CCGCGCAAGA TCGCTGCCAT CGTCATCACG GGGCAGGACG ACAGCCCGTC CAACGTGTTG CCGCCCGATG CGGAGACCAA TGCCATCGCG GGGCATCTGA ACGCATTCCT GGCGCGCGAG GTGCGCACGG GCCGTCTTTC GCCCACGCTG CAGCCGCTGC AGGCGGGTAT CGGAACGATC TCCAACGCGG TCCTGCATGG CTTCATCGAC TCGCCGTTCC ATGACCTCAA GATGTATTCG GAGGTTTTGC AGGACAGCTC CATCGAGCTG CTCGACTCGG GCAAGCTGGC GTTTGCCTCG GCCTCGTCGA TCACGCTGTC ACGCCCGGTC TACAAGCGGT TTCTGTCAGA ACTGGAACGC TACAAGACGC GGGTGATTCT GCGACCGCAG GAGATCAGCA ACCACCCGGA AGTGATCCGC CGGTTGGGCC TGATCACCAT CAATACCGCG CTGGAATGCG ATATCTACGG CAACGTGAAT TCGACGCACG TGGGCGGAAC GCACATGATG AACGGCATCG GCGGCTCGGG CGACTTCGCG CGCAACGCGC ATCTGTCAGT CTTCGTGACC AAGTCATTGG CCAAGGCCGG CGACATCTCG AGCATCGTGC CGATGGTCTC GCATGTGGAC CATACCGAAC ACGACGTCGA CATCATCGTT ACCGAACATG GACTGGCCGA TCTGCGCGGG TTGGCGCCGC GCGAGCGTGC TGTGCAGATC ATCAGCAACT GCGCTGATCC GCGCTACCGC GAGCTGCTGC GCGACTACGT TGTGCGCGCG CAGCGGCGCG GCGGGCATAC GCCCCACCTC CTGGAGGAGG CGCTGGCCTG GCATGTCCGG TTTCGCGACC AGGGCTCGAT GGCCTCAGCC GGGCTCACAG GTGAAAGTCT GCTCCCGGAA CCCGCCCTCA GCGCTTGA
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Protein sequence | MTSDIGGRIR LQSLLDKVVS ADEAATLIHD GMTVGMSGFT RAGDCKAVPF ALARRAAHEP LRITLMTGAS LGNDIDKVLA EADVIARRLP FQADATLRRK INAGEVMFID QHLSETVEQL RSRQIAPLDV AVVEATAITE NGGIVPTTSV GNSASFAVLA KQVIVEINLN MPANLEGLHD IFFPVQRPYR QPIPLIAAEQ RIGLPSIPID PRKIAAIVIT GQDDSPSNVL PPDAETNAIA GHLNAFLARE VRTGRLSPTL QPLQAGIGTI SNAVLHGFID SPFHDLKMYS EVLQDSSIEL LDSGKLAFAS ASSITLSRPV YKRFLSELER YKTRVILRPQ EISNHPEVIR RLGLITINTA LECDIYGNVN STHVGGTHMM NGIGGSGDFA RNAHLSVFVT KSLAKAGDIS SIVPMVSHVD HTEHDVDIIV TEHGLADLRG LAPRERAVQI ISNCADPRYR ELLRDYVVRA QRRGGHTPHL LEEALAWHVR FRDQGSMASA GLTGESLLPE PALSA
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