| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1332 |
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| Symbol | ldcA |
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| ID | 6286924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1424715 |
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| End bp | 1425641 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624901 |
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| Product | L,D-carboxypeptidase A |
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| Protein accession | YP_001898907 |
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| Protein GI | 187928420 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.25727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTG TCCGCCTGAT TGCGCCTTCC GGTTATCCGA ACGATGCGGC CATCGCCGAG
CGCGGCGTGG CGGCACTGGA AGCGCAGGGC TGCACGGTCG TCAACCGCGA GTGCCTGAGC
CGGCAGCATC AGCGTTTTGC CGGCGGTGAA CTTGCGCGGC TGGCAGACCT AAACCAGATC
GGTACGGGCG GTGGCCAGGA AATCGCCATG GCCATTCGTG GGGGGTATGG CCTGACGCGC
TTGCTGGACC ATATCGACTT CATCGACATC GGCCGCCGCG CGCAGGCGAC CGACGCCATC
ATCGTCGGTC ACAGCGATTT CACCGTGTTT TCGCTGGCGT ACCTGGCGGC CACCGGCGGC
GTGACGTTTG CCGGCCCGCA TGTGTGTTCG GACTTCGGGC TGGAGACGGT CGACCCGTTC
ATGGTCGAGC ACTTCTGGGG CATCTTGCGA AACCCGACCT ATGCGTTGCG CGTGGATGGT
CCGCAACCGA CTGGCTGCGC ACGGCCGGGC CGCTACGCCG GCACGCTATG GGGCGGCAAT
CTGGCCATGC TGTGCAGCCT GATCGGCACG CCGTATCTGC CGGATATCCG CGACGGCATC
CTGTTTGTTG AGGACATCAA CGAGCATCCG TACCGCGTTG AACGCATGCT GCTGCAATTG
CAGCAGGCTG GCGTGCTCGA TGCGCAGCAG GCGCTGTTGT TTGGCGATTT CTCCGGATAT
CGCACCACGC CGTACGACGC CGGCTACGAT TTCGACGCCA TGCGCGATTA TCTGGCCGAA
CGCCTGTCGA TTCCGGTCGT CACCGGCTTG CCGTTCGGCC ATTGCCCGAC CAAGGCGACG
CTGCCGATTG GCGCACAAGC CGAGCTGGAT GTCGACGCCG CGGGCTTTAC GCTGCACTTG
TCGGGATACC CGACACTGAA GGCATAA
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| Protein sequence | MTTVRLIAPS GYPNDAAIAE RGVAALEAQG CTVVNRECLS RQHQRFAGGE LARLADLNQI
GTGGGQEIAM AIRGGYGLTR LLDHIDFIDI GRRAQATDAI IVGHSDFTVF SLAYLAATGG
VTFAGPHVCS DFGLETVDPF MVEHFWGILR NPTYALRVDG PQPTGCARPG RYAGTLWGGN
LAMLCSLIGT PYLPDIRDGI LFVEDINEHP YRVERMLLQL QQAGVLDAQQ ALLFGDFSGY
RTTPYDAGYD FDAMRDYLAE RLSIPVVTGL PFGHCPTKAT LPIGAQAELD VDAAGFTLHL
SGYPTLKA
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