Gene Rpic_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1326 
Symbol 
ID6288912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1419636 
End bp1420334 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID642624895 
ProductDSBA oxidoreductase 
Protein accessionYP_001898901 
Protein GI187928414 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.243068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC TCGCCCGACC GCAGACAGCC CCCCGGCCTG CCGCATACAA CGCCACGTGG 
GAAGCGCTCG TCCCCGCGCC CACCGTCGAG TTCTGGTTCG ACTTCGCGAG CAATTACAGC
TACCCGAGTG TGATGCGCAT CGAGGCCGCC GCGGTGCAAC ACGGTGTGCG CGTGGTGTGG
AAGCCGTTCC TGCTCGGGCC GAGCTTCCAG TCGCTCGGCT GGGCCAGTTC GCCGTTTGTG
CTGCAACGGG CCAAAGGGCA CTACGTCTGG CAAGACATGG CGCGCGAATG CGCTAAACAC
GGTTTGCCGT GGACGCAGCC GAGCACGTTT CCACGTGCGT CCGTCCTGCC GCTGCGTGTG
GCGCTGCTCG GTGCAGACGC GCCGTGGGTC GGTGCCTTCT GCCAACGCAT CATGCTGCGC
AATTTCGCGC AGGACCGCGA CATCCACACG CCTGACGCCG TGGCAGAAGA ACTGACGGCG
CTCGGCTTGC CGGTCGACGC CATCCTCGCT CAGGCACAGT CCGACGCAAG CAGGCTAGGC
CTGCGCGAGC AAACGCACGC CGCGCAGATT CGTGGCATCT TTGGCGCTCC CACGTTCTTT
GTCGGCGACG CGATGTTCTG GGGCAACGAC CGCCTGGACG ATGCGCTCGC CTGCGCCGTA
GCATTGCAGT CCAATCCTGG TTCATATCAC AGCGGATAA
 
Protein sequence
MDTLARPQTA PRPAAYNATW EALVPAPTVE FWFDFASNYS YPSVMRIEAA AVQHGVRVVW 
KPFLLGPSFQ SLGWASSPFV LQRAKGHYVW QDMARECAKH GLPWTQPSTF PRASVLPLRV
ALLGADAPWV GAFCQRIMLR NFAQDRDIHT PDAVAEELTA LGLPVDAILA QAQSDASRLG
LREQTHAAQI RGIFGAPTFF VGDAMFWGND RLDDALACAV ALQSNPGSYH SG