| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1325 |
|---|
| Symbol | |
|---|
| ID | 6286096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1418805 |
|---|
| End bp | 1419632 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642624894 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001898900 |
|---|
| Protein GI | 187928413 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.252605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCC AGATCGAAAA AGCTCGTGCC TTCCGCGTAC TGCACGAACG CAGCGGCACC
TTCGTGATCC CCAACCCGTG GGACCCGGGA TCGGCTCGGC TATTGGCATC ACTCGGCTTC
GAAGCATTGA CCAGCACCAG CGCGGGCTTC GCGTTCTCGC GCGGGCTGCC TGACTATGGC
GTTGCCCGCG ACACCATCCT CGCGCACGTG GCCGATCTGG CGGCCGCCAC GGACGTGCCC
ATGGCTGCCG ACCTGGAAAA CGGCTTTGGC GATGGGCCGG AAACGGTGGC CGAGACGATC
CGCCTGGCAG GCGCCACCGG CATCGTCGGC GGCTCGATTG AAGATGCAAC GGGCCGCGCA
GATGCGCCCA TCTATTCCCT GGAAGCTTCG GTCGACCGTG TGCGCGCGGC GGTGGAGGCT
GCGCGGTCGC TGCCGTTTCC GTTCACGCTC ACCGCACGTG CCGAGAACCA CCTGCACGGC
CGCAACGACC TGGCCGACAC GATCCGCCGC CTGCAGGCTT TTCAGGACGC CGGCGCCGAC
GTGCTGTACG CCCCCGGCCT GAAAACGCGC GACGAGATCG CCACCGTGCT GCGCGAGATC
GACCGCCCGC TCAACGTGCT GATGGGCTTC GCCGACGGCA ACCTGAGCGT GGCAGAACTG
ACGGAATTGG GCGTCAAGCG CATCAGCGTG GGCGCCACGC TGGCACGTGT GGCCATGGGT
GCGTTCCAGC GTGCAGCGGA AGAACTGCGC ACCGCCGGGA CGTTCAACTT TGCGCGCGAT
GCCGCCAGCG GAGCCAAGCT CAACGGCCTC TTTGCGCCGT TCGCCTGA
|
|---|
| Protein sequence | MPTQIEKARA FRVLHERSGT FVIPNPWDPG SARLLASLGF EALTSTSAGF AFSRGLPDYG
VARDTILAHV ADLAAATDVP MAADLENGFG DGPETVAETI RLAGATGIVG GSIEDATGRA
DAPIYSLEAS VDRVRAAVEA ARSLPFPFTL TARAENHLHG RNDLADTIRR LQAFQDAGAD
VLYAPGLKTR DEIATVLREI DRPLNVLMGF ADGNLSVAEL TELGVKRISV GATLARVAMG
AFQRAAEELR TAGTFNFARD AASGAKLNGL FAPFA
|
|---|
| |