| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1299 |
|---|
| Symbol | |
|---|
| ID | 6286955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1397074 |
|---|
| End bp | 1397499 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642624869 |
|---|
| Product | protein of unknown function DUF107 |
|---|
| Protein accession | YP_001898875 |
|---|
| Protein GI | 187928388 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCTC TGACCGTCTG GTTTTCTCTG GCCGTGCTGC TCGTCATCGG CGAGCTGATG
ACGGGGACCT TCTATCTGCT GATGGTGGCA ATCGGCCTGC TCGCAGGCGG CCTTGCCGCG
CTGATCGGCC TCGCATTCCC TGCGCAGGCG ATCGTTGCCG CCATCGTGGC GGTATTCGGC
ATCGTCGGGC TGCGGCGTAC GCGCTATGGG CGCGTCACGC GCGAGAATGC CGCCCGCAAT
CGCAACGTCA ATCTGGACAT TGGCGAGATG TTGCGCGTCG ATGCCTGGTC GCCGGAGCGC
CGCGCGCGCG TGCAATATCG CGGCGCCGCG TGGGATGTCG AACTCGCGCC GCACGCGCCG
GCCACGGGTG GCGAATTCCG GATCGTCGAA GTACGTGGCA ACGTGCTTGT TGTCGCGCCC
AGATAG
|
|---|
| Protein sequence | MSALTVWFSL AVLLVIGELM TGTFYLLMVA IGLLAGGLAA LIGLAFPAQA IVAAIVAVFG
IVGLRRTRYG RVTRENAARN RNVNLDIGEM LRVDAWSPER RARVQYRGAA WDVELAPHAP
ATGGEFRIVE VRGNVLVVAP R
|
|---|
| |