| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1288 |
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| Symbol | lpxD |
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| ID | 6287035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1384522 |
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| End bp | 1385595 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624858 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_001898864 |
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| Protein GI | 187928377 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.301363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.582697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTT CGCTTGGTGA ACTTGCTGCG TCGCTCGGCG CGACCGTCCA GGGTGACGCA
GGCCTGATCG TCAAGTCGAT CGCGCCGCTG GATCAAGCGG GCGCCGATCA GCTCGCTTTT
CTCTCCAATC CGCTGTACCT CAATCAGGCT GTGAGTTCCG GTGCGGGGGC GATCATCGTG
TCGCCCCGCG ATCTGGAAAC GCTCGAAAGC CAGGGCCACG CTGCTGGCCG GAACTGGCTG
ATTGCGGCCA ATCCGTATGC TGCGTTTGCG CGCGTTGCCC AGCGCTTTGT TGCGCTGGCC
GCGCGCCCCG TTGTACCGGG CATTCACCGG ACTGCCAGCG TGGAAGAGGG CGCCAGGGTG
CCGGCATCCT GCTCCATCGG CCCGAACGTC ACCATCGAAG CCGGTGCTGT GCTCGGCGAG
CGTGTGCGCA TCGCCGGCAA CAGCTTTGTT GGCGCCGATG CCCGGATTGG CGACGACACG
TTGCTCTACG CGAACGTTTC GATTTACCAC GGCTGCGTTG TTGGCGCGCG CTGCGTTCTG
CATAGCGGCG TCGTGATCGG CGCCGATGGC TTCGGCTTTG CACCCGACTT CGGGCCGCAG
GGCGGCGAAT GGGTGAAGAT TCCGCAGGTT GGCCGGGCCG TGATTGGTGA CGACGTGGAG
ATCGGCGCAA ACACCGCCAT CGACCGTGGC GCGATGGCCG ATACGGTGGT CGAACAGGGC
TGCAAGATCG ACAACCAGGT GCAGATCGCG CACAACGTGC ACGTGGGTGC CTATACCGTC
ATCGCGGGCT GCGCGGCCAT TTCCGGCAGC ACGAAGATCG GGCGCTACTG CATCATCGGC
GGTGCGGCCA ATTTTGCCGG CCACCTGACC ATTGCGGACC GCGTGACCGT TTCGGGCGGC
ACATCCATTA CCAAATCCAT CACCAAGCCC GGTGGCCACT TCACCAGCGT TTTCCCGTTC
ATGCCGCATG GCGACTGGGA GCGTAACGCG GCCATCGTCC GAGGCCTGAC GCGCATGCGC
GAACGGTTGC AACAACTGGA ACAGCGGGTC AAAGACCTGC AGCAACAATC ATGA
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| Protein sequence | MSFSLGELAA SLGATVQGDA GLIVKSIAPL DQAGADQLAF LSNPLYLNQA VSSGAGAIIV
SPRDLETLES QGHAAGRNWL IAANPYAAFA RVAQRFVALA ARPVVPGIHR TASVEEGARV
PASCSIGPNV TIEAGAVLGE RVRIAGNSFV GADARIGDDT LLYANVSIYH GCVVGARCVL
HSGVVIGADG FGFAPDFGPQ GGEWVKIPQV GRAVIGDDVE IGANTAIDRG AMADTVVEQG
CKIDNQVQIA HNVHVGAYTV IAGCAAISGS TKIGRYCIIG GAANFAGHLT IADRVTVSGG
TSITKSITKP GGHFTSVFPF MPHGDWERNA AIVRGLTRMR ERLQQLEQRV KDLQQQS
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