| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1285 |
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| Symbol | |
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| ID | 6289311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1380159 |
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| End bp | 1381547 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624855 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_001898861 |
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| Protein GI | 187928374 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.453164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.348794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGACCG TTTTAGCGTT TGTCTTTGCG ATCGCGGTAC TGATCGTCAT TCACGAACTG
GGCCACTACA GTGTCGCGCG CCTGTGCGGC GTGAAGGTGC TCCGGTTTTC CGTCGGCTTC
GGCAAGGTGC TGTTCCGCCA TGTGGGGCGC GGCCCTGACC GCACCGAATG GACGATCTGC
GCCATTCCGC TGGGCGGCTA CGTCAAGATG TTGGGCGAGG GCTCACGAGA CCCCGAGAAA
GATCCGCCCA TCCTCCCCGA AGACCTCCCG CGCACCTTCG ACCACCAACC GGTTTACAAG
CGATTCGCCA TCGTGGCTGC GGGGCCGATC GCCAATTTTC TGCTCGCGAT TGTCCTCTAT
GCAGTGCTGG CATGGGTTGG CGCAATCGAG CCGTTACCTA TCCTCGGCGC TCCCCCGCCT
GGCAGCATTG CTGCCCAGGC CGACCTGCGT GCCAGGGACC GCGTGACCGC GATCGGTACG
GACGATGAAA CGCCTGCGCC CGTGCGCAGC TGGAGCGACG TGCGCATGCG CCTGTACTCG
GCCGGCATCG CAGGGCGCGA TGCGCTTGTG CGGGTGCGGG GCGCCGATGG TGTCGAACGC
ACCGCCCGTC TTCATGGCTT GCCGAGCGCA GCCCGTACGC CGCAGGCCGA CGTGATCGAC
CAGATTGGTC TGCGCCTGCT CGGTGGCCCG GTCACCGTCG TCGATGTGCT GCCCTCCAGT
GCCGCGGCAC GTGCCGGGTT GCGGGCGGGT GACCAGATCG TTCGCTTCGC CGGCCAGCCT
GCCGATCAGG CGATGGACCT CATCCGGCAG ATCCGCGCCA TGCCCGAACA GAACGCGTCG
ATCGATATCC TGCGCAACGA TCAGCCCATG ACGTTGCCCG TTCGCCCGGA TGCAGACGCC
GATCCCAAGA ACCCCACGGG CCCGAAGATC GGTAAGCTCG GCGCGCAGCT CAACCAGAAG
GTGGAAACGG CGATGATCCG GGATGAGCCG GTCGCCGCAT TGGGCCACGC CGTGGGCGAG
GTCTGGCGGA CTTCGGCGCT ATCGCTGCAG GTGCTGGCCA AGATGATCGT TGGTCAGGCG
TCTCTGCAGA ACCTGAGCGG GCCGATCACG GTGGCGGACT TCGCAGGCAA GGCGGCAAGC
CTTGGCTGGC AGACGTTTGT GAGCTTTCTC GCGTTGATCA GCGTGAGTCT CGGCGTCCTG
AACTTCTTGC CAGTTCCGGT ATTGGATGGG GGGCATTTGC TGTATTATTG CGTGGAATTT
TTGACTGGCC GACCCGTGCC GGAATCCTGG CAAGCAGTCC TTCAGAAGAT CGGCGTCGCC
TGCATCCTGC TTCTCACTTC GCTCGCCCTG TACAACGATT TGAGTCGGTT ATTTCTGACT
CGCGGCTAA
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| Protein sequence | MQTVLAFVFA IAVLIVIHEL GHYSVARLCG VKVLRFSVGF GKVLFRHVGR GPDRTEWTIC
AIPLGGYVKM LGEGSRDPEK DPPILPEDLP RTFDHQPVYK RFAIVAAGPI ANFLLAIVLY
AVLAWVGAIE PLPILGAPPP GSIAAQADLR ARDRVTAIGT DDETPAPVRS WSDVRMRLYS
AGIAGRDALV RVRGADGVER TARLHGLPSA ARTPQADVID QIGLRLLGGP VTVVDVLPSS
AAARAGLRAG DQIVRFAGQP ADQAMDLIRQ IRAMPEQNAS IDILRNDQPM TLPVRPDADA
DPKNPTGPKI GKLGAQLNQK VETAMIRDEP VAALGHAVGE VWRTSALSLQ VLAKMIVGQA
SLQNLSGPIT VADFAGKAAS LGWQTFVSFL ALISVSLGVL NFLPVPVLDG GHLLYYCVEF
LTGRPVPESW QAVLQKIGVA CILLLTSLAL YNDLSRLFLT RG
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