Gene Rpic_1283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1283 
Symbol 
ID6289309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1378052 
End bp1378870 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content65% 
IMG OID642624853 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_001898859 
Protein GI187928372 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0776695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.172321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGA CTCGCGTCAT TACCGCTGTC TGCCTGCTGA TTGTCATCCT GCCCATTCTG 
TTCTTTGCGC CGCCCGCCGG CCTGGCCGGG CTCGTGACGG TGGTTGCAGC CCTCGCCGCG
TGGGAGTGGG GGCGTCTCGT GCGCCTGCCG GGCTGGTGGG GGCCGGTTGT CTATGCGATC
GTTGTCGTCA TGCTGACGAT CGCCTGGCAC GACATTCCCG TTCGCGGTGA TGTGCAGCCG
CTGTTCCATG GCGCAGTCGT CGCATGGGTG ATCGCCTGGG CGCTGCTCGC CGGTGGCGTG
CGCGAGCTGC ACGGCACGCG CAAAATCGTT TTCACGTTGC TTGGTTTGGT GATGCTGCCG
GCGTTCGTGC ATGGGGCTAT TGAATTGCGC ACGCACGGCG TCGCCTTCCT GCTGTCGGTG
GCGGTGCTCG TGTGGGCGGC CGATGTGGGT GCCTATTTTG TCGGCAAGGC CATGGGTCGC
CGCAAGCTGG CACCGACCAT CAGCCCAGGC AAATCGTGGG AAGGGGCGAT CGGCGGTGCC
GTGCTCGTTG CAGTGATCGC CACCGTGGCC GGCATCACGC ATTGGTTTGC GCCGACGTGG
TTCTCGCACG AGTTTGATCA GCGCGGTGCG GTTGCAGCCC TGGCGCTGAC CATCTTGCTG
GTGGCCGCAA GCGTCGGCGG CGATTTGTTT GAATCCCTGC TCAAGCGTCA GGTCGGCATG
AAAGACAGCA GCCGCCTGTT GCCCGGCCAC GGCGGTGTGC TCGATCGTAT CGACGCACTG
CTGCCAGTGT TTCCGCTGGC TGCGCTGCTG ATTTCCTGA
 
Protein sequence
MLLTRVITAV CLLIVILPIL FFAPPAGLAG LVTVVAALAA WEWGRLVRLP GWWGPVVYAI 
VVVMLTIAWH DIPVRGDVQP LFHGAVVAWV IAWALLAGGV RELHGTRKIV FTLLGLVMLP
AFVHGAIELR THGVAFLLSV AVLVWAADVG AYFVGKAMGR RKLAPTISPG KSWEGAIGGA
VLVAVIATVA GITHWFAPTW FSHEFDQRGA VAALALTILL VAASVGGDLF ESLLKRQVGM
KDSSRLLPGH GGVLDRIDAL LPVFPLAALL IS