Gene Rpic_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1274 
Symbol 
ID6287069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1366563 
End bp1367684 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content66% 
IMG OID642624844 
Productputative transmembrane protein 
Protein accessionYP_001898850 
Protein GI187928363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.12139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGAG ATGGTTTGAG GGGCTGGCGC CGGCTGGCGC TTGGTGTGGC CATGACGGCG 
ATGCTGGGGG TGGCGGCGTG CGCGGGGCCG CAGGCACCGG AAACGCCGGC GGCCGCACCG
GTTGCCCAGA AGGCTCAGAG CCCAGTCTGG CAACGCGTGC GTCTGGGTAC GGATGCGGTG
GCCTACGATT TCCCTGTCTA TGCAAACCAT CCGCTTGATG GCGACCTGAG CGGCATCCGC
GAAGTCGTAT TCGTTCAGCA CGGCCTGCAG CGCAACGGAA ACGACTACTA CACCGCTGGC
GCCGATCTGC TCCAGGCCAG CGGCCGCAAT CCCGACGAGG TCCTGCTGAT TGCCCCGAAC
TTTCCCGGCA CGCCCGATGA GGGCAAGGGT TTCGACGGCA TGCCCGTGTG GTCGGTGGAC
GGCTGGATCG GGGGCTTCAA CGCCACCAAC GCACCCTACA CGGACCTGAG TTCGCTCAAG
GTGCTGGATG ACCTGATCGG CTACGTGACC GACCCGGCAC GCGCGCCCAA CGTCAAGCGC
GTAACGGTGG CAGGCCACTC GGGCGGTGGC CAGATCGTGC AACGCTACGC TGTGCTCAAC
AACGTCGACG AGGTGATCCG CAAGCGCGGC ATCGACCTGC GCTACGTGGT CGCCAACCCC
TCGTCATATC TGTATTTCAC GCCGGAGCGT CCGAGCGGCA AGGGCTTTGC GCGCTACAGC
ACCAGCGTCT GCCCCGACTA CGATCACTAC AAGTACGGCA TGGTCGACAT GGTTCCGTAT
GCCGCCGGCA AGACCGGCCG CCAGCTGTTC AACCGCTACG CGCAGCGCCA CGTGACGTAC
CTTGCCGGCA CGAGCGACAA CGATCCGAAC CACCGCGTGC TCGACAAGCT GTGCGGTGCC
GAGGCCGAAG GCCCGACGCG CGTGGATCGC GCACGCAACT ACTGGCGCTA CGAGCGCCAC
ATGGCGGGAC GCAAGCGCGT CAATCACCAG GCGCACGAAG TGGTTGGCGT AGGCCACGAC
CAGGCGAAGA TGTTCGGCTC GCGCTGCGGC GCGCAAGCTG TGTTCGGCAT GCCTGCATCG
GCCAACACCG CGGGTGCAGC TTGTCAGGCG CCGCATCTGT AA
 
Protein sequence
MRRDGLRGWR RLALGVAMTA MLGVAACAGP QAPETPAAAP VAQKAQSPVW QRVRLGTDAV 
AYDFPVYANH PLDGDLSGIR EVVFVQHGLQ RNGNDYYTAG ADLLQASGRN PDEVLLIAPN
FPGTPDEGKG FDGMPVWSVD GWIGGFNATN APYTDLSSLK VLDDLIGYVT DPARAPNVKR
VTVAGHSGGG QIVQRYAVLN NVDEVIRKRG IDLRYVVANP SSYLYFTPER PSGKGFARYS
TSVCPDYDHY KYGMVDMVPY AAGKTGRQLF NRYAQRHVTY LAGTSDNDPN HRVLDKLCGA
EAEGPTRVDR ARNYWRYERH MAGRKRVNHQ AHEVVGVGHD QAKMFGSRCG AQAVFGMPAS
ANTAGAACQA PHL