Gene Rpic_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1268 
Symbol 
ID6287365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1356515 
End bp1357435 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID642624838 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_001898844 
Protein GI187928357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.169133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA TAGCCTCCTC CGCGGACGCC TCCGCCCACC ACGAGCCGCA ATGGGCGGCG 
GCATTCTTCA TCCTCCTGGG CGCCTCGGTC TGGGGCATTT CCTGGTATCC ATACCGCCTG
CTCGCCGCCT GGGGGCTGGG CAGCATGCTG GCCTCGTCGA TGACGGGCGC GGCTGCGGCC
GTCCTGGCCG CCGTGGTGCT GCGTCGTCAC TTTTCGACGT TCCAGTGGTC GTGGCTGATT
CCGGCGCTCG GGGTTGCAGC GGGCATCACC AATGCGGGTT TCGTCTGGGG CACGGTGCAC
GGCACGGTCA TGCGGGTGCT GCTCCTGTTC TATCTGACGC CCGTCTGGAC GGCCCTGTTG
GCGCGCCTAT GGCTGCACGA GCGGCTGGGC TGGCGTGGCG GTGTGTTGCT GGCGCTGGCA
TTGTCAGGCG CGGGGATGAT GCTGTGGTCG GGCGAGGCCG GCACGCCGTG GCCGGGTTCA
TCTGCGGAAT GGGCGGGGCT GATTGCGGGG CTCGCTTTTG CGTGCAACAA CGTGCTGTCC
CGCCTGGCGG GGCAGCGTCA CCCGACCATG CGCCCTGAAA TGCGCACCGT GGTCGTCTTC
ACCGGCTGCG CGTTGGTGGG CTTTCCGGCT GCGCTGCTGC TCGATGGCGT GCGCGCGGTG
CCGGCGGCTT TGTCGCAAGG CAATACGTGG CTGCTGCTGG TGGGCATGGC CTGCGTGCTG
GTGGGCGGCA ATGCGATGGT GCAGCGCGGC TTGCAATGCT TGCCGGCCAA TCGCGCGGCG
CTGCTGATGC TGTTCGAAAT CGTGGTCGCG GCCGCGTCAT CGGCGCTGCT GACGGCGGAG
CGCTTGTCTC CCCACGAAAT GCTGGGCGGC GCCTGCATCA TCCTGGCAGG TGCGCTGTCG
GGGCTGTTGC GGCGCAGGTA G
 
Protein sequence
MTSIASSADA SAHHEPQWAA AFFILLGASV WGISWYPYRL LAAWGLGSML ASSMTGAAAA 
VLAAVVLRRH FSTFQWSWLI PALGVAAGIT NAGFVWGTVH GTVMRVLLLF YLTPVWTALL
ARLWLHERLG WRGGVLLALA LSGAGMMLWS GEAGTPWPGS SAEWAGLIAG LAFACNNVLS
RLAGQRHPTM RPEMRTVVVF TGCALVGFPA ALLLDGVRAV PAALSQGNTW LLLVGMACVL
VGGNAMVQRG LQCLPANRAA LLMLFEIVVA AASSALLTAE RLSPHEMLGG ACIILAGALS
GLLRRR