Gene Rpic_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1261 
Symbol 
ID6288346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1350827 
End bp1351729 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID642624831 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_001898837 
Protein GI187928350 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0715503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.584452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CTACCCTCCC CGCCTCCCAC CCGTTCACGA CCGTGCGCGA CCTGCTGCGC 
TACGCCGTGT CGCGCTTCAC CGCCGCCGGG CTTGTCTTCG GCCACGGCAG CGAGAACGCC
TACGACGAAG CCGCTTACCT GATCCTGCAC ACGCTGCATC TGCCGATCGA CACGCTGGAG
CCATTCCTGG ATGCGCGCCT GCTGCCCGAA GAAGTGGCTG CCGTGCTGAA GGTGATCGAG
CGCCGCGCCG TCGACCGCGT GCCCGCCGCG TACATCACGC ACGAGGCGTT CATGCACGGC
ATGCGCTTCT ATGTGGACGA GCGCGTGATC GTGCCGCGCA GCTTCATCGG CGAATTGCTG
GAAGACGGTC TGGAACCGTG GATCGACCAG GAGGACGGCC CGACCGATGT GCTGGAGCTA
TGCACCGGCT CGGGCTGCCT GTCGATCCTG GCTGCGCTGC AATGGCCCAA TGCAACCATC
GATGCGGTGG ACCTGTCGCC GGATGCACTG GTGGTGGCCA ATCGCAATGT CGACGAATAC
CGCCTGCAAG ACCGCATCCG CCTGCATGAG GGCGACCTGT ATGCGCCGCT GCCGCCGGGT
GTGCACTACG ACGTGATCCT GACGAATCCG CCGTACGTAA ACGAGGCGTC GATGCAGGCG
CTGCCGCCCG AGTACCGCGC CGAGCCGCAC ATGGCGCTGG CCGGCGGCAA CGACGGCATG
GACATCGTAC GCCGCATCCT GGCCGATGCA CCGCGCCACT TGAAGCCGCA CGGCGTGCTG
GTGGTGGAAA TCGGCAACGA GCGTGAAAAC GTTGAGGCGG CGTTCCCGGA TCTCGACTTG
GTCTGGCTGC CGACCAGCGC AGGCGAAGAC CAGGTGTTCC TCGTCACGCG CGAAGCGCTG
TAA
 
Protein sequence
MTTPTLPASH PFTTVRDLLR YAVSRFTAAG LVFGHGSENA YDEAAYLILH TLHLPIDTLE 
PFLDARLLPE EVAAVLKVIE RRAVDRVPAA YITHEAFMHG MRFYVDERVI VPRSFIGELL
EDGLEPWIDQ EDGPTDVLEL CTGSGCLSIL AALQWPNATI DAVDLSPDAL VVANRNVDEY
RLQDRIRLHE GDLYAPLPPG VHYDVILTNP PYVNEASMQA LPPEYRAEPH MALAGGNDGM
DIVRRILADA PRHLKPHGVL VVEIGNEREN VEAAFPDLDL VWLPTSAGED QVFLVTREAL