Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1245 |
Symbol | |
ID | 6289338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1333268 |
End bp | 1334638 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642624815 |
Product | DNA repair protein RadA |
Protein accession | YP_001898821 |
Protein GI | 187928334 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.579553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCAAGA GCAAGACGGT CTATACGTGC ACCGAATGTG GTGGCACGGC ACCGAAGTGG GCGGGGCAGT GCCCGAATTG CCAGCAGTGG AACACGCTGG TGGAAACCGT CGCGCAGCCG ACGTCCGGCG CCGGCGCGCG CTTCCAGTCG CTCGCCTCCA GCGCGACGGT GCGCAAGCTG TCGGACATCG ACGCGGTGGA TGTGCCGCGC TTCTCCAGCG GCATCGACGA ATTTGACCGC GTACTGGGCG GTGGCCTGGT CAGCGGCGGT GTTGTGCTGA TCGGCGGCGA TCCCGGGATC GGCAAATCGA CGCTGTTGCT GCAGGCGCTG TCCAACCTGT CGGCCGATCG GCGGGTGTTG TACGTGAGCG GCGAGGAGTC CGGCTCGCAG ATCGCGCTTC GTGCGCGTCG CCTGGGCATC GAAAGCCCGA ACCTTGCGCT GCTGGCGGAG ATCCAGCTGG AGCGCATCCA GGCGACGATA GAAACGGAAA AGCCGGAAGT CGTCGTCATC GATTCGATCC AGACGCTGTA TTCCGAGGCG CTGACCTCGG CGCCAGGCTC CGTGGCCCAG GTGCGGGAAT GCGCGGCGCA GTTGACGCGC ATTGCCAAGC GGCTGGATGT GACGACCATT CTCGTTGGCC ATGTGACCAA GGAAGGCGCG CTGGCAGGCC CCCGTGTGCT CGAACACATT GTCGATACGG TGCTGTATTT CGAGGGCGAT ACGCATTCCG CCTACCGGCT GGTGCGGGCG TTCAAGAACC GTTTCGGCGC CGTCAACGAG CTGGGCGTGT TTGCGATGAC GGAGCGCGGC CTGCGTGGCG TGGCGAATCC GTCGGCGCTC TTCCTGTCGC AGCACGAACA GGTGGTGCCG GGCTCGTGCG TGCTGGTGAC GCAGGAGGGC ACGCGGCCGC TGCTGGTGGA AATCCAGGCG CTGGTGGATA CGGCCAACGT GCCGAACCCG CGCCGCCTGG CGGTGGGCCT GGAGCAGAAT CGGCTGGCGA TGTTGCTGGC GGTGCTGCAC CGCCACGCCG GCATTGCGTG CTTTGACCAG GACGTGTTCC TGAACGCGGT GGGCGGCGTG AAGATTACCG AGCCCGCGGC GGACTTGGCG GTGCTGTTGG CGATCCATTC GTCGATGCGC AACAAGGCGC TGCCGCGCGG GCTGGTCGTG TTTGGGGAGA TCGGCCTTGC CGGGGAAATC CGCCCGACGC CGCGCGGTCA GGAGCGGTTG AAGGAAGCGG CCAAGCTGGG CTTCTCGATT GCCGTGATCC CGAAATCCAA CGCCCCGAAG CAGGCAATCG ATGGGCTGGA GGTCATTGCC GTCGAGCGCA TTGAACAGGC CATCGATCGG GTGCGGGCGC TCGAGGCTTG A
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Protein sequence | MAKSKTVYTC TECGGTAPKW AGQCPNCQQW NTLVETVAQP TSGAGARFQS LASSATVRKL SDIDAVDVPR FSSGIDEFDR VLGGGLVSGG VVLIGGDPGI GKSTLLLQAL SNLSADRRVL YVSGEESGSQ IALRARRLGI ESPNLALLAE IQLERIQATI ETEKPEVVVI DSIQTLYSEA LTSAPGSVAQ VRECAAQLTR IAKRLDVTTI LVGHVTKEGA LAGPRVLEHI VDTVLYFEGD THSAYRLVRA FKNRFGAVNE LGVFAMTERG LRGVANPSAL FLSQHEQVVP GSCVLVTQEG TRPLLVEIQA LVDTANVPNP RRLAVGLEQN RLAMLLAVLH RHAGIACFDQ DVFLNAVGGV KITEPAADLA VLLAIHSSMR NKALPRGLVV FGEIGLAGEI RPTPRGQERL KEAAKLGFSI AVIPKSNAPK QAIDGLEVIA VERIEQAIDR VRALEA
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