Gene Rpic_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1226 
Symbol 
ID6287193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1313906 
End bp1315174 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content65% 
IMG OID642624796 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001898802 
Protein GI187928315 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.789837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.527092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAA CCCCAAGCTT CAACGCCGGA GAACCGTCCG GTAAGATCGC CAGCATGTTC 
GCCAATGTGT CGTTCCCTTC GCTTGCAGAC TGCATGCGCC TGGCCCGGCG CTGGGTGATC
CGCTATACCG TCATCATCGT CATCAATACG GTGATTGCGG CGGTGCTGGC GTTCGGCATC
CGGCCGGAAG AGACCTTCTG GAAAGACTTC ATCTTCAGCC AGGCAATTGG GCTGTCGATG
TTTTCGTTGA TCGGCATCCC GCGTCACGTG CTCTGGGGCG ACGGCCCGCC CAACAAGAAA
ATGTTTCCGT GGATCATCGT GGGCGCAGTG CTGATCGGCG TGCCGCTGGG GCAGTGGATC
GCGCGGACGA TCCTGTGCCT GAACAACCCT AACGCGGAAC CCTGGCGAGC CGACAGCCTG
CGCATGAGTT TCATCATCGC CATGCTGGCC GCGCTGGGCG CAACGTATTA CTACTGGTCG
CGCGGCAAGC TGGCCGCATT GCAGCGCCAG GCTGCGCTCG ATGCGCTGGA GCGGGAAGAA
GCCGAGAAGC AGGTCGTACG TGCGCAACTG ATGGCGCTGC AGGCGCAGAT CGAGCCGCAC
TTCCTGTTCA ACTCGCTGGC CCACGTCGAT GTGCTGATCG CCCGGGACCC GGCTGCGGCG
CGGCGTCTGC TGCAGCATTT GATCGGCTTT CTGCGCAGCT CGCTCTCGCA CGCACGCGCC
GAGCAGTGCA CGCTCGCGCA GGAATTTGCC CTGCTGCGCG CGTATCTCGA CATCCAGGCG
CTGCGCTTCG GCAATCGCCT GCGTTTCTCC TTGGCGCTGA ACGACGCCAT CGCCAACATC
GTCATCCCGC CGATGCTGAT TCAGCCGCTG GTGGAAAACG CCGTGGTGCA CGGTATCGAG
CCCGCACGCG AGGGCGGCGA GATCGCCTTG TCTGCGCGCC TGGCGGCCAG CAGCGAGGGC
GAGCGGCTCG TGCTGGAAGT GCGCGATACG GGTGTCGGTT TCGGCAATGA CGGCGCCAAG
GGATCGGGGC TGGGGCTCAC GCACGTGCGT GAACGCCTGT CGCGCTTGTT TGATGGCGAT
GCACGCCTGA CGATCACGGA GACCGTTCCG CACGGCGTGA CGATCATCGT CGAACTGCCG
CTGGTGCACG AAACGGCGCC CGTACCGTCT CAAGCCGACG CGCCGGAATG GCGCTGCCGC
TTTTCGCGCT CCGCGGCCAA CGCCACTGCC ACCGATGCAC TGTCTTCGCG CGTATCCGCC
GGAACCTGA
 
Protein sequence
MRETPSFNAG EPSGKIASMF ANVSFPSLAD CMRLARRWVI RYTVIIVINT VIAAVLAFGI 
RPEETFWKDF IFSQAIGLSM FSLIGIPRHV LWGDGPPNKK MFPWIIVGAV LIGVPLGQWI
ARTILCLNNP NAEPWRADSL RMSFIIAMLA ALGATYYYWS RGKLAALQRQ AALDALEREE
AEKQVVRAQL MALQAQIEPH FLFNSLAHVD VLIARDPAAA RRLLQHLIGF LRSSLSHARA
EQCTLAQEFA LLRAYLDIQA LRFGNRLRFS LALNDAIANI VIPPMLIQPL VENAVVHGIE
PAREGGEIAL SARLAASSEG ERLVLEVRDT GVGFGNDGAK GSGLGLTHVR ERLSRLFDGD
ARLTITETVP HGVTIIVELP LVHETAPVPS QADAPEWRCR FSRSAANATA TDALSSRVSA
GT