Gene Rpic_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1222 
Symbol 
ID6289715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1310380 
End bp1311360 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content63% 
IMG OID642624792 
Productsulfate ABC transporter, inner membrane subunit CysW 
Protein accessionYP_001898798 
Protein GI187928311 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4208] ABC-type sulfate transport system, permease component 
TIGRFAM ID[TIGR00969] sulfate ABC transporter, permease protein
[TIGR02140] sulfate ABC transporter, permease protein CysW 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.917674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.204361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTA CTGTTTCCCG TCAACTTGGT CAGGCGCCCG CTGTTGGCCG CCGTGGGGCC 
ACCGCAGAAT CCGCTTGGGT GCGCGCCACG CTGATCCTCA TATCGTTCGT GTTCCTGGCG
CTGTTCCTGT TCGTGCCGCT GGCGAGCGTG TTCTACGAGG CGTTCAAGAA AGGCATCGAC
GTCTACCTTG AAGCGCTGAT CGAGCCCGAT GCGCTGTCCG CGATTTACCT GACACTGACG
GTCGCGGCGA TTGCGGTGCC GCTGAACGTG GTGTTTGGCG TAGCCGCGGC GTGGGCGATC
GCCAAGTTCG AGTTTCGCGG CAAGAACCTG CTGCTCACGC TGATCGACTT GCCGTTCTCG
GTATCGCCCG TCATTGCCGG CCTGATCTAC GTGCTGCTGT TCGGCGCGCA GGGCTGGTTC
GGGCCTTACC TGTCCGACCA CGACTTCAAG GTCATCTTTG CTGTGCCGGG CATCGTGCTG
GCCACGGTGT TCGTCACGTT TCCGTTTGTG GCGCGCGAGC TGATTCCGCT CATGCAGGCG
CAGGGCAGCG AAGAGGAAGA GGCCGCCATC GTGCTCGGCG CCTCGGGCTG GCAGACGTTC
TTTCGCGTGA CGCTGCCGAA CATCAAGTGG GGCCTGTTGT ACGGCGTGAT CCTCTGCAAC
GCGCGGGCGA TGGGCGAGTT TGGCGCGGTG TCGGTGGTGT CTGGCCACAT TCGCGGGCTG
ACCAACACGA TGCCGCTGCA CGTGGAAATT CTCTACAACG AATACAACTT TGCGGCCGCG
TTTGCCGTGG CGTCGTTGCT GACGTTGCTG GCGCTTGTGA CGCTGGCACT GAAGACGCTG
GTCGAATGGC GCAGCCGCCG CGAGCTGGCA GACGCAGATG CCGGCGTGGG CGAGGGGCCG
GGCCAGCGCG TTACGCAACA AACACCGATT TCGAATTCGC ACGTCGCCGT GCAATCTCCG
CTCGAAGGGA GCGCAGCATG A
 
Protein sequence
MAGTVSRQLG QAPAVGRRGA TAESAWVRAT LILISFVFLA LFLFVPLASV FYEAFKKGID 
VYLEALIEPD ALSAIYLTLT VAAIAVPLNV VFGVAAAWAI AKFEFRGKNL LLTLIDLPFS
VSPVIAGLIY VLLFGAQGWF GPYLSDHDFK VIFAVPGIVL ATVFVTFPFV ARELIPLMQA
QGSEEEEAAI VLGASGWQTF FRVTLPNIKW GLLYGVILCN ARAMGEFGAV SVVSGHIRGL
TNTMPLHVEI LYNEYNFAAA FAVASLLTLL ALVTLALKTL VEWRSRRELA DADAGVGEGP
GQRVTQQTPI SNSHVAVQSP LEGSAA