| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1219 |
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| Symbol | |
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| ID | 6287797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1307777 |
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| End bp | 1308661 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642624789 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001898795 |
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| Protein GI | 187928308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.223497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA TGCACACCAC AGCACTCGCA CAATTTCTCG GCACGCTGCC GAGCGCCCCG
ACGCCGGACC GCCAGTTGTG GCGCGACGCC GCCGGCCGCG TGCAGGGCCA GTTCTTCCAC
TGCGCGCTGA CCAGCCTGTT TGAACCGGTC TGGCAACTGG CTGCCGATGG CGCGCTGGCG
CCCGCCGGCC ACGAAGCGCT GATGCGCACG TGGACGCGCG ACGGCGATCT GGGCCTGAAC
CCGTGGAAGG TGTTTTCGCT GGCGTCGGAT GACGGCACGC TGGTCGAACT GGACCGCCTG
TGCCGGCTGG TGCATACGCT CAACTATTTT TCCCGCACCG ATGCGCGGCG GCTGGTCGTC
AATGTGCATG GCCGGTTGCT GGCGGCGGTG GCGGCCGATC ATGGCAAGGC GTTTCACCGT
GCGGTGACGG CGCTTGGGCT GCATCCCGAG CAGTTCGTCA TCCAGGTGCC GTCCACGGCC
AATGACGATC TGGGGCTGCT GCTGTTCGTG GTGGACAACT ATCGGCGCAA CGGTTTTGCT
GTGGCGGTGC AGGCATCGGA CCCGGCGGAA GCCGGCGCGC TGCTCGTGCA TGCCCGGCCC
GCCTATCTGA AGCTCGATGC ACGGCGCGAC TGGCGTACAC GAAACGTGGT GTCGCTGGCC
GATTCCGCAC GGGAGTTGGG CGTGACGCTG GCCTTGCGGC GGTGCGAACG CCCGAGCGAC
CTGGAGCTGG CCCGCGCTGC CGGTATCGCC TATGTGCAGG GCAGCATCCT GCCCGGCGCG
GAGCCCGAGC CGGACGCTGT GCCCACGCCA CTGGTGGTAC CGATGGCGCA GGCGCCGCTG
GTGCAACAGC AGCAGTGCGC CGCCGGCCTT TCTCTGACGC AATGA
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| Protein sequence | MSLMHTTALA QFLGTLPSAP TPDRQLWRDA AGRVQGQFFH CALTSLFEPV WQLAADGALA
PAGHEALMRT WTRDGDLGLN PWKVFSLASD DGTLVELDRL CRLVHTLNYF SRTDARRLVV
NVHGRLLAAV AADHGKAFHR AVTALGLHPE QFVIQVPSTA NDDLGLLLFV VDNYRRNGFA
VAVQASDPAE AGALLVHARP AYLKLDARRD WRTRNVVSLA DSARELGVTL ALRRCERPSD
LELARAAGIA YVQGSILPGA EPEPDAVPTP LVVPMAQAPL VQQQQCAAGL SLTQ
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