Gene Rpic_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1217 
Symbol 
ID6286171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1306611 
End bp1307450 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID642624787 
ProductABC transporter related 
Protein accessionYP_001898793 
Protein GI187928306 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.216616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCA ATGCCACTGA ACACGCCGCG CTGGCCGGCA CCGCCCTGCA CATCGAACAC 
GTCGTCAAAC GCTACGGCGA TCGTGAAGTG CTGCATGGCA TCGATCTGGA CATCACGCCG
GGCGAGTTTG TCGTCATCGT TGGCCGCAGC GGCTGCGGCA AGAGCACGCT ACTGCGATTG
ATTGCCGGGC TGGAAGGCAT TGACGACGGC CACCTGCGTC GCGACGGTGA AGCAGAAGAC
GGCCTGCATG ACGATGCCCG CGTGATGTTC CAGGACGCCC GTCTGTTGCC GTGGAAGAAG
GTGCTCGACA ACGTCGCGCT GGGCTTGCCG AAAACGCAGC GTGCGCAAGC CGCTGAAGTG
CTTGCGCAAG TCGGACTGGC CGAGCGGGCA GGGGAATGGC CGGCACGCCT GTCAGGCGGA
CAGCGCCAGC GCGTGGCATT GGCGCGTGCG CTGGTGCATC GACCGCGCTT GCTGCTGCTG
GATGAGCCGC TGGGCGCGCT TGATGCGCTC ACCCGCATCG ACATGCAGAA CCTTATCGAA
GGCCTGTGGC AGCGCCTGGG CTTTACGGCC GTGCTCGTCA CGCACGACGT GGCCGAGGCG
GTGGCGCTCG CCGACCGTGT GGTGCTGATC GAAGACGGCC GCATCACACT CGATGAACGC
ATTGATCTGC CGCGTCCGCG CCATCGTGGT TCGCCCGCGT TTGCGCGGCT GGAGGAATCC
ATCCTCAACC GTGTGATGCA GCGCAAGATC GATCCGAATG AAGTGACCGA TGTGCGTTCG
CACACGGCGT GGGCATCACC CTTTGACGTG TCCGCCACAT CCGTGCGCTG GGCCGTGTAA
 
Protein sequence
MQSNATEHAA LAGTALHIEH VVKRYGDREV LHGIDLDITP GEFVVIVGRS GCGKSTLLRL 
IAGLEGIDDG HLRRDGEAED GLHDDARVMF QDARLLPWKK VLDNVALGLP KTQRAQAAEV
LAQVGLAERA GEWPARLSGG QRQRVALARA LVHRPRLLLL DEPLGALDAL TRIDMQNLIE
GLWQRLGFTA VLVTHDVAEA VALADRVVLI EDGRITLDER IDLPRPRHRG SPAFARLEES
ILNRVMQRKI DPNEVTDVRS HTAWASPFDV SATSVRWAV