Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1217 |
Symbol | |
ID | 6286171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1306611 |
End bp | 1307450 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624787 |
Product | ABC transporter related |
Protein accession | YP_001898793 |
Protein GI | 187928306 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.216616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAGCA ATGCCACTGA ACACGCCGCG CTGGCCGGCA CCGCCCTGCA CATCGAACAC GTCGTCAAAC GCTACGGCGA TCGTGAAGTG CTGCATGGCA TCGATCTGGA CATCACGCCG GGCGAGTTTG TCGTCATCGT TGGCCGCAGC GGCTGCGGCA AGAGCACGCT ACTGCGATTG ATTGCCGGGC TGGAAGGCAT TGACGACGGC CACCTGCGTC GCGACGGTGA AGCAGAAGAC GGCCTGCATG ACGATGCCCG CGTGATGTTC CAGGACGCCC GTCTGTTGCC GTGGAAGAAG GTGCTCGACA ACGTCGCGCT GGGCTTGCCG AAAACGCAGC GTGCGCAAGC CGCTGAAGTG CTTGCGCAAG TCGGACTGGC CGAGCGGGCA GGGGAATGGC CGGCACGCCT GTCAGGCGGA CAGCGCCAGC GCGTGGCATT GGCGCGTGCG CTGGTGCATC GACCGCGCTT GCTGCTGCTG GATGAGCCGC TGGGCGCGCT TGATGCGCTC ACCCGCATCG ACATGCAGAA CCTTATCGAA GGCCTGTGGC AGCGCCTGGG CTTTACGGCC GTGCTCGTCA CGCACGACGT GGCCGAGGCG GTGGCGCTCG CCGACCGTGT GGTGCTGATC GAAGACGGCC GCATCACACT CGATGAACGC ATTGATCTGC CGCGTCCGCG CCATCGTGGT TCGCCCGCGT TTGCGCGGCT GGAGGAATCC ATCCTCAACC GTGTGATGCA GCGCAAGATC GATCCGAATG AAGTGACCGA TGTGCGTTCG CACACGGCGT GGGCATCACC CTTTGACGTG TCCGCCACAT CCGTGCGCTG GGCCGTGTAA
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Protein sequence | MQSNATEHAA LAGTALHIEH VVKRYGDREV LHGIDLDITP GEFVVIVGRS GCGKSTLLRL IAGLEGIDDG HLRRDGEAED GLHDDARVMF QDARLLPWKK VLDNVALGLP KTQRAQAAEV LAQVGLAERA GEWPARLSGG QRQRVALARA LVHRPRLLLL DEPLGALDAL TRIDMQNLIE GLWQRLGFTA VLVTHDVAEA VALADRVVLI EDGRITLDER IDLPRPRHRG SPAFARLEES ILNRVMQRKI DPNEVTDVRS HTAWASPFDV SATSVRWAV
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