Gene Rpic_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1215 
Symbol 
ID6286169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1304597 
End bp1305760 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content67% 
IMG OID642624785 
Productalkanesulfonate monooxygenase 
Protein accessionYP_001898791 
Protein GI187928304 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03565] alkanesulfonate monooxygenase, FMNH(2)-dependent 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.117303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTT TCTGGTTCAT CCCGACGCAC GGCGACAGCC GCTATCTCGG CACCGCCGAG 
GGCGCACGCC AAGTCGATCA CACCTATCTG CAGCAGGTGG CCGTGGCCGC CGATACGCTC
GGCTACGAGG GCGTGCTGAT TCCCACCGGC CGCTCGTGCG AAGACCCGTG GGTCGTGGCC
GCGAGCCTGA TTCCGGTCAC GAAGCGCCTG CGTTTCCTGG TGGCGGTGCG CCCCGGGTTG
ATGGCGCCCA CGCTGGCTGC CCGCATGGCC GCCACGTACG ACCGTCTGTC GAATGGCCGC
TTGCTGGTGA ACCTTGTCAC GGGTGGCGAT CCTGCAGAGC TGGCCGGCGA TGGCCTGTTC
CTGGATCACG CGCAACGCTA CGAGGCCTCG GAAGAGTTCA TCCGCATCTG GCGTGAAACG
CTGGCGGCAA GCCACGAAGG TGCAGCGCTG GACTACACCG GCAAGCACCT CAGCGTGAAG
GGCGCGAAGG TACTGTATCC GCCCGTGCAG CGGCCGCATC CGCCCGTGTA TTTCGGTGGG
TCGTCGGAAG CGGCGCACGA GCTGGCTGCG GAACAGGTCG ACTCGTATCT CACCTGGGGC
GAACCGCCTG CCGCCGTGGC CGAAAAGATT GCCGACGTGC GTGCGCGCGC TGCCAAGCAT
GGCCGCACCG TGCGCTTCGG TATCCGCCTG CACGTGATCG TGCGCGAGAC GGAAGACGAA
GCCTGGGCGG CCGCCGACAA GCTCATCAGC AAGCTCGACG ACGACACCGT GGCCCGTGCG
CAAGAGGCTT TCCGCAAGAT GGATTCGGCC GGCCAGCAAC GCATGGCCGC GCTGCATGCC
AACGGCGTCA AGCGCACGCG CGCCGATCTG GAGATCAGCC CGAACCTGTG GGCCGGCGTG
GGTCTGGTGC GCGGTGGTGC CGGCACGGCG CTCGTGGGCG ATCCGCAAAC CGTGGCCGCG
CGCATGAAGG AATACGCCGA TCTGGGGATC GATACGTTCG TGCTGTCCGG CTATCCGCAT
CTGGAAGAGG CCTATCGGTT TGCCGAACTG GTGTTCCCGC TGCTGCCGCG CTCGGTGCGC
GACAAGCTGC CGGGCAACGT GCTGAACGGC CCGTTTGGCG AAGTGATCGC CACCGGTATC
GTGCCGCGCG TGGCGGCAAG CTGA
 
Protein sequence
MQVFWFIPTH GDSRYLGTAE GARQVDHTYL QQVAVAADTL GYEGVLIPTG RSCEDPWVVA 
ASLIPVTKRL RFLVAVRPGL MAPTLAARMA ATYDRLSNGR LLVNLVTGGD PAELAGDGLF
LDHAQRYEAS EEFIRIWRET LAASHEGAAL DYTGKHLSVK GAKVLYPPVQ RPHPPVYFGG
SSEAAHELAA EQVDSYLTWG EPPAAVAEKI ADVRARAAKH GRTVRFGIRL HVIVRETEDE
AWAAADKLIS KLDDDTVARA QEAFRKMDSA GQQRMAALHA NGVKRTRADL EISPNLWAGV
GLVRGGAGTA LVGDPQTVAA RMKEYADLGI DTFVLSGYPH LEEAYRFAEL VFPLLPRSVR
DKLPGNVLNG PFGEVIATGI VPRVAAS