| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1212 |
|---|
| Symbol | |
|---|
| ID | 6287651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1301783 |
|---|
| End bp | 1302406 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642624782 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_001898788 |
|---|
| Protein GI | 187928301 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | [TIGR03567] FMN reductase, SsuE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.15525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0454424 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATCC TGACGATTTC CGGCAGCCCT TCGGCGCAAT CGCGATCTGC GCGCCTGCTG
GGCCACGTGC GTGCGCAGCT CGAACGCGCC GGCGAGCAGG CGGACCACCT GGACCTGCGC
AGCCTTCCAG CCGACGCGCT GCTCGGCGCG CAGGTGTCCG ACCCCGCCAT CGCCGATGCG
GTGGCGCGGG TGGAAGCGGC GGGCGTGGTG ATTCTTGCCA CGCCGGTCTA CAAGGCGGCC
TACAGCGGGC TGCTCAAGAC GTTTCTCGAT CTGCTGCCGC AGAGCGGGCT GCGCGACAAG
GTCGTGCTGC CGATTGCCAC TGGCGGCAGC CTGGCCCATA CGCTGGCGAT CGATTACGCG
CTGCGCCCCG TGCTGACGGC GCTGGCGGCG CGCTCGATCC TGCCCGGCAT CTTTGCAGTC
GACTCGCAGA TCGTCGTGGC GGATGACGGC GTGACCGTTG ACCCATCGCT GCAGCAGCGC
CTGGATGACG GCGTGGAGCG CGTGCATCAG GCACTGGCGC TGGCACGGCA TCCGGCCGTG
GCGCAGGTCA TCGTTTCGAG CCGCAGCGCG GTGCGTGCCA CGTTCCAGGC CGCCGACGAA
GAACGAATGC GATGTCTGGC GTGA
|
|---|
| Protein sequence | MQILTISGSP SAQSRSARLL GHVRAQLERA GEQADHLDLR SLPADALLGA QVSDPAIADA
VARVEAAGVV ILATPVYKAA YSGLLKTFLD LLPQSGLRDK VVLPIATGGS LAHTLAIDYA
LRPVLTALAA RSILPGIFAV DSQIVVADDG VTVDPSLQQR LDDGVERVHQ ALALARHPAV
AQVIVSSRSA VRATFQAADE ERMRCLA
|
|---|
| |