| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1202 |
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| Symbol | |
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| ID | 6286235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1289413 |
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| End bp | 1290732 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624772 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_001898778 |
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| Protein GI | 187928291 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0498363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCA TCAAGATCGG CCTGCTCGGG CTCGGTACCG TCGGTGGCGG TACCCTCAAG
GTTCTGCAAC GGAACCAGGA AGAAATCCGC CGTCGCGCGG GTCGCGGCAT TGAAGTCGCC
ATGATTGCCG TGCGCAATCT CGACCGGGCC CGTGCCATCG TGCAGGAGGC CGGTGCGACC
GTGCCGGTGG TGAACGACCC GTTTGCGATT GTGGATTCGC CCGAGATCGA TATCGTCGTG
GAGCTGATCG GCGGCTATGA CCTGACGCGC GAGCTGGTGC TGCGCGCCAT CGCCAACGGC
AAGCACGTTG TCACCGCCAA CAAGGCGCTG CTGGCCGTGC ATGGCAACGA AATCTTCAAG
GCCGCGCAGG ACAAGGGCGT GATGGTGGCA TTCGAAGCCG CCGTGGCCGG TGGCATCCCC
ATCATCAAGG CGCTGCGCGA AGGTCTGACG GCCAACCGCA TCGAGTGGAT CGCGGGCATC
ATCAACGGCA CCACGAATTT CATCCTGTCC GAGATGCGTG ACAAGGGTCT GGATTTCGAT
ACGGTGCTCA AGGAAGCCCA GCGCCTGGGC TACGCTGAAG CCGATCCGAC GTTCGACATC
GAAGGTTTTG ACGCCGCGCA CAAGCTCACG CTCATGAGCG CCATCGCCTT TGGCGTGCCG
GTGCAGTTCG AGCGCGCATA TGTGGAAGGC ATCACCAAGC TGGAAGCCGT CGACATCCGC
TACGCCGAAG AACTGGGCTA CCGCATCAAG CTGCTGGGCA TCACGCGCCG TGTCGAGGCG
GGCATCGAGC TGCGCGTGCA TCCGACGCTG GTGCCGACCA AGCGCCTGAT CGCCAACGTC
GAAGGCGCGA TGAATGCCGT GGTCGTCAAC GGCGATGCCG TGGGCCCGAC GCTGTACTAC
GGCAAGGGTG CCGGTGCTGA GCCGACCGCT TCGGCCGTGG TCGCCGATCT GGTGGACGTG
ACGCGCCTGC ATACGGCTGA CCCCGAGCAC CGCGTGCCGC ATCTGGCGTT CCAGCCGGAC
GCGCTGTCCG ACACGCCGGT ACTGCCGATC GACGAAGTGC GTTCGAGTTA CTACCTGCGC
ATGCGCGTGG CGGATGAAAC CGGCGTGCTG GCCGACATCA CGCGCATCCT AGCCGAGGGC
GGCATCTCCA TCGACGCGAT GCTGCAGAAG GAATCGCGCG AAGGCGAGCC GCAGACCGAC
ATCATCATGC TGTCGCATGT GACGGTGGAA AAACGCGTGA ACGCCGCCAT CGCCGCCATC
GAAGCGTTGC CGACCGTGCT GTCGAAGGTC ACGCGCATCC GCATGGAAGA ACTGAACTAA
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| Protein sequence | MNPIKIGLLG LGTVGGGTLK VLQRNQEEIR RRAGRGIEVA MIAVRNLDRA RAIVQEAGAT
VPVVNDPFAI VDSPEIDIVV ELIGGYDLTR ELVLRAIANG KHVVTANKAL LAVHGNEIFK
AAQDKGVMVA FEAAVAGGIP IIKALREGLT ANRIEWIAGI INGTTNFILS EMRDKGLDFD
TVLKEAQRLG YAEADPTFDI EGFDAAHKLT LMSAIAFGVP VQFERAYVEG ITKLEAVDIR
YAEELGYRIK LLGITRRVEA GIELRVHPTL VPTKRLIANV EGAMNAVVVN GDAVGPTLYY
GKGAGAEPTA SAVVADLVDV TRLHTADPEH RVPHLAFQPD ALSDTPVLPI DEVRSSYYLR
MRVADETGVL ADITRILAEG GISIDAMLQK ESREGEPQTD IIMLSHVTVE KRVNAAIAAI
EALPTVLSKV TRIRMEELN
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