| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1199 |
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| Symbol | |
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| ID | 6288410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1285719 |
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| End bp | 1287389 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624769 |
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| Product | glycosyl transferase family 39 |
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| Protein accession | YP_001898775 |
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| Protein GI | 187928288 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0554948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCG ACCGCACCGC TCAAGCGCCC TCCCTACCCT GGCGCAATGC CTCCCTGTGG
CTGCTGGCTG CTGCGTTGCT CGCTGTCTGG CTCGGTACGC TGGGCTATCG GCACCTGATT
CCCACCGACG AAGGCCGCTA CGCCGAAATC GCGCGCGAGA TGTTCGTCTC CGGCGACTGG
GTAACCATCC GCTACAACGC CCTGAAGTAT TTCGAAAAGC CGCCGCTGCA GATGTGGGGC
ACCGCACTCG CCTATACGCT GTTCGGCATC GGCGACTGGC AGGCGCGCCT GTTCACCGCG
CTTTCCGGCA TCGTCGGCAT TGTGTTCACG ATGCTGGCGG CGGCGCGCTG GTGGGGCAAG
CGGACGGCGA TCATCAGCGG GCTGGTGCTC GTGAGCGCGC CCCTGTGGAA CGTCGGTTCG
CACTTCAATT CGCTCGACAT GGGCGTGGCC GGCTGCATGA CGATGGCGCT GGGTGCGCTG
CTGCTCGCCC AGCATCCGGA TGCCACACGC GCTCAACAAC GCGGCTGGAT GTGGGCCTGC
TGGGCGTCGA TGGCGCTCGC GGTGCTGAGC AAGGGCCTGA TCGGCGTGGT GCTGCCAGGC
TTTGTGCTCG TGGTCTACAC GCTGATCGCG CGCGACTGGG CCCTGTGGAA ACGATTGCAT
CTTCTGACCG GACTGATCGT CTTCTTTGCC GTGGGCGCGC CGTGGTTTGT GTTGATCTCG
ATGCGCAACC CCGAATTCGC CTGGTTCTTC TTCGTGCACG AGCACTTCCA GCGCTTCACG
TCGACCGTGC ACAACCGCAA CGCGCCGCTC TGGTATTTCG TTCCTCTGCT GGTCGCCGGT
TTCCTGCCTT GGCTGGCACA ATTGCCCGGC GCCGCGCGCC TAACCATGGC GCGCGCCGAA
ACCGCGAGTA ACGGCTTCCG CCCGACGCTG GTGCTCGGCC TGTGGGCCGT CCTGATCTTC
GCGTTTTTCA GCATTTCGGA CTCGAAGCTG CCGGGTTACA TCTTCCCGAT CATTCCCGCG
CTGGCGATTC TGGCGGCCTT GGTGCTCGAG CACACCAGCG AGCCCGCATG GCGCTGGCAA
CTCAAGGCCT TCCTGGCGCT GGCACTGGTT GGCCTTGCGG CCAGCGGTTA CGTGGCAACC
ATGTCGTCGG AGATGTACCC GAACGCAGTG TTTTCTAGGT TTGCGATGTT CCTGGTTGTG
GCGTTCGTGG CGGGAGCCGG GTTGACGTGG CTCGCGCTTC GCCTGGCGGA CAGGCGCTTT
GAAAGCGTGG CTGCATTTGC GTGCGCTTGG TTCCTTACCT TTACAGCGGC GATGCTCGGT
CACGAGGCAT TTGGGCGCTC CATGTCGGGT ATCGATCTCG TGCCGGCCGT CAAGGCGTGG
CTCAAGCCAG ACGTTCCGTT CTATGCGGTG GAGCGTCTGG ACCATACAAT GCCGTTTTAC
CTCGGCAGGG CCATCATCAT GGTGCAGGAA CCCGACGAAT TGGCCTTTGG CGTCGAACAG
GAGCCGGCCA AATGGGTTCC GACCACCGAA GCGTTCGTGG CCCGCTGGAA AGCCGGCGGC
CAAGCTGTCG CCATGATGGG ACCGGGCACC TATGACCGGC TGACAGCCCA GAGCGTACCG
ATGATCGTGA TCGCCCGCGA TGCCCGCCGC GTGATTGTCC GGCGCAACTA G
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| Protein sequence | MPIDRTAQAP SLPWRNASLW LLAAALLAVW LGTLGYRHLI PTDEGRYAEI AREMFVSGDW
VTIRYNALKY FEKPPLQMWG TALAYTLFGI GDWQARLFTA LSGIVGIVFT MLAAARWWGK
RTAIISGLVL VSAPLWNVGS HFNSLDMGVA GCMTMALGAL LLAQHPDATR AQQRGWMWAC
WASMALAVLS KGLIGVVLPG FVLVVYTLIA RDWALWKRLH LLTGLIVFFA VGAPWFVLIS
MRNPEFAWFF FVHEHFQRFT STVHNRNAPL WYFVPLLVAG FLPWLAQLPG AARLTMARAE
TASNGFRPTL VLGLWAVLIF AFFSISDSKL PGYIFPIIPA LAILAALVLE HTSEPAWRWQ
LKAFLALALV GLAASGYVAT MSSEMYPNAV FSRFAMFLVV AFVAGAGLTW LALRLADRRF
ESVAAFACAW FLTFTAAMLG HEAFGRSMSG IDLVPAVKAW LKPDVPFYAV ERLDHTMPFY
LGRAIIMVQE PDELAFGVEQ EPAKWVPTTE AFVARWKAGG QAVAMMGPGT YDRLTAQSVP
MIVIARDARR VIVRRN
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