| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1197 |
|---|
| Symbol | |
|---|
| ID | 6287719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1284020 |
|---|
| End bp | 1285180 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642624767 |
|---|
| Product | Glutamine--scyllo-inositol transaminase |
|---|
| Protein accession | YP_001898773 |
|---|
| Protein GI | 187928286 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.790744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.223497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAA CCACCGCCAC TGCCGAGCTG CCGTTCCTGC CCTTTGTACG CCCGACCATT
GACGAGGCGA CCATCGCCGC CGTGGCCGAT GTGCTGCGCT CGGGCTGGAT CACCTCGGGC
CCCAAGGTTG CCGCATTCGA AGCCGCGCTG TCGGAATACT TCGGCGGCCG CATCGTGCGC
ACATTCGCCA ATGGCACGGC CACGATGGAA GTCGCGCTGC GCATCGCGGG CATCGGCCCC
GGCGACGAGG TGATTACCAC GCCGATCTCG TGGGTCGCCA CGTCCAACGT GGTGCTGACG
GTCGGTGCCA AGCCCGTCTT CGTCGACATC GACCCCGTGA CGCGCAACAT CGACTTGGAC
AAGGTCGAGG CCGCCATCAC GCCGCGTACC AAGGCGATCA TTCCGGTGTA TCTGTCTGGG
CTGCCCGTGG ATATGGATCG TCTGTACGAC ATCGCGCGCC GCCATAAGCT GCGCGTGGTG
GAAGACGCTG CACAGGCCAT TGGTTCGCGC TGGGGCGACA AGCGCATCGG ACAGATCGGC
GACCTGGTCA GCTTCAGCTT CCAGGCCAAC AAGAACATCA CCACCATCGA AGGCGGTGCG
CTGGTGCTCA ACACGCACGA AGAAGCCGTG CTGGCCGAAA AATATCGCCT GCAAGGCGTC
GTGCGCACCG GCTTTGACGG CATGGAAGTC GATCTGGTGG GCGGCAAGTT CAACCTGACG
GACGTGAATG CCGCCATCGG CCTGGGCCAG TTCGCTCAGT TGGAAGCCGT CACTGCACGC
CGCGCAGCGC TAGCCCGCCG CTACTTTGCC GGCATGCGCG CAGCCGACAT CGAGTCGTTC
GGCGTCGAGC TGCCGGTGGA GAACTTTACG AATACCAACT GGCACATGTT CCAGATCGTG
CTGCCGCTGG ATCGCCTGAA GGTCGATCGC GCCGGGTTCA TGGCTGGCCT GAAGACGCTG
GGCATCGGCG CGGGCGTGCA CTATCCGCCG ATCCACCTGT TCAAGCTCTA TCGCGAACTC
GGCTGGAAGC CGGGCATGTT CCCGGTGGCC GAACGCATTG GCCGTGCCAT CGTTACGCTG
CCGATGTTTG CCGGCATGGA AGATTCCGAT GTGGATCGCG TGGTCAGCGC GGTCCGCCAA
CTTTGCGCCC AGTACCAATA A
|
|---|
| Protein sequence | MTQTTATAEL PFLPFVRPTI DEATIAAVAD VLRSGWITSG PKVAAFEAAL SEYFGGRIVR
TFANGTATME VALRIAGIGP GDEVITTPIS WVATSNVVLT VGAKPVFVDI DPVTRNIDLD
KVEAAITPRT KAIIPVYLSG LPVDMDRLYD IARRHKLRVV EDAAQAIGSR WGDKRIGQIG
DLVSFSFQAN KNITTIEGGA LVLNTHEEAV LAEKYRLQGV VRTGFDGMEV DLVGGKFNLT
DVNAAIGLGQ FAQLEAVTAR RAALARRYFA GMRAADIESF GVELPVENFT NTNWHMFQIV
LPLDRLKVDR AGFMAGLKTL GIGAGVHYPP IHLFKLYREL GWKPGMFPVA ERIGRAIVTL
PMFAGMEDSD VDRVVSAVRQ LCAQYQ
|
|---|
| |