Gene Rpic_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1187 
Symbol 
ID6287721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1274152 
End bp1274778 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content57% 
IMG OID642624757 
Productprotein of unknown function DUF47 
Protein accessionYP_001898763 
Protein GI187928276 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0873064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0562102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTC GCTTCATGCC CACCGAAGGC AAGTTTTTTG AGTACTTCAA CCAGCACGCC 
GAGTGCGCCG TCAAGGCGGC CCACGCGCTG AAGGAGCTGG TCAACGATTT GCCCAATGCC
GAAATGCATG CACGCAACGT GCAGAATTTT GAAAAGAAGG CCGATCGCAT CACGCATGAC
ACGATCGAAC TGCTGCACAA GACTTTCATC ACCCCGCTTG ATCGCGACGA GATCCACAAG
TTGATCACGA CGATGGACGA CATCCTCGAC CTGATGGAAG ACGTGTCGCT CACCATCTCG
TTGTACGACG TGACCAACGT GACGGACGAG GCGCGCCAGC TCGCGACCAT CTGCGTGGCT
TGCTGCGAGG AAGTCCGCAA GGCCGTGGCG CTGCTCAGCG ACATGAACAA CGGCCGCCAG
ATCCTCACCA TTGCCCACGA AATCGACCGT CTTGAGTCGG ATGCCGATCG CGTGATGCGC
GCTGCCATGG CCAAGCTGTT TCGCACCGAG AACGACATCA AGCTGCTGAT CAAGCTCAAG
GCGATCTACG AACAACTGGA GAGCATCACC GACCGTTGCG AGGATGTCGC CAACATCATC
GAAGGCATCG TGCTCGAAAA CGCCTGA
 
Protein sequence
MFGRFMPTEG KFFEYFNQHA ECAVKAAHAL KELVNDLPNA EMHARNVQNF EKKADRITHD 
TIELLHKTFI TPLDRDEIHK LITTMDDILD LMEDVSLTIS LYDVTNVTDE ARQLATICVA
CCEEVRKAVA LLSDMNNGRQ ILTIAHEIDR LESDADRVMR AAMAKLFRTE NDIKLLIKLK
AIYEQLESIT DRCEDVANII EGIVLENA