Gene Rpic_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1182 
SymbolrpsF 
ID6286129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1270968 
End bp1271336 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content60% 
IMG OID642624752 
Product30S ribosomal protein S6 
Protein accessionYP_001898758 
Protein GI187928271 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0492029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.220406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCATT ACGAAATCGT ATTCATCGTC CATCCGGACC AGAGCGAGCA AGTGCCCGCG 
ATGATCGAGC GCTACAAGAG CACGGTCACC TCGCAAGGCG GCCAAGTGCA CCGCGTCGAG
GACTGGGGCC GTCGTCAACT GGCCTACATG ATCCAGAAGC TCGCGAAGGC TCACTACGTG
TGCCTGAACA TCGAGTGCGG CAAGGAAACC CTGGCTGAGC TTGAGCACGC CTTCAAGTTC
AACGACGCCG TGCTGCGTCA CCTCATCGTT CAGACCAAGA AGGCTGAAAC GGCGCCGTCG
CCGATGATGA AGGAAGTCGC ACGCGAAGAG GCCAAGAAGG CCGCCGCTCA GACCGAACAG
GCCGCCTGA
 
Protein sequence
MRHYEIVFIV HPDQSEQVPA MIERYKSTVT SQGGQVHRVE DWGRRQLAYM IQKLAKAHYV 
CLNIECGKET LAELEHAFKF NDAVLRHLIV QTKKAETAPS PMMKEVAREE AKKAAAQTEQ
AA