| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1179 |
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| Symbol | |
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| ID | 6289728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1268064 |
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| End bp | 1268714 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624749 |
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| Product | LexA repressor |
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| Protein accession | YP_001898755 |
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| Protein GI | 187928268 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.865174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.239395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCACCC TCACCCCCCG CCAGCAGCAG ATTTATGACC TCATCCGCCA GACGATCCAG
CGCACGGGCT TTCCGCCGAC GCGCGCCGAG ATTGCCGCGG AGTTTGGCTT CTCGTCGCCC
AATGCGGCTG AGGAACACCT CCGCGCGTTG GCACGCAAGG GCGTGATTGA ACTGACGCCG
GGCGCCTCGC GTGGCATTCG GCTGCGGGCG GCGGGCGACA CGGCGCAGCA TCAGTTCTCG
CTGCCGTCGA TGGGATTGAT GCAGTTGACA CTGCCGCTGG TGGGCCGCGT GGCCGCCGGT
AGTCCGATCC TGGCTGCCGA GCATATTGAT CGCCAGTACC AAGTGGATCC GTCGCTGTTC
TCTGCGCAGC CCGATTTTCT GCTGAAGGTG CGTGGTATGA GCATGCGCGA CGCCGGCATT
CTCGATGGCG ATCTACTGGC CGTGCAGCGC GCCAGTGAAG CCACCAACGG CAAGATCGTC
GTGGCTCGAC TGGGCGACGA CGTCACGGTC AAGCGCTTCC AGCGCAAGGG CCGGCATGTC
GAGCTGATTG CCGAGAACCC CGATTTCGAA CCGATCCACG TTGATCTGGA TCGCGATGAG
TTTCACCTGG AGGGCTTGGC CGTCGGTCTG ATCCGGCCTG CTGCTCCGTA A
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| Protein sequence | MATLTPRQQQ IYDLIRQTIQ RTGFPPTRAE IAAEFGFSSP NAAEEHLRAL ARKGVIELTP
GASRGIRLRA AGDTAQHQFS LPSMGLMQLT LPLVGRVAAG SPILAAEHID RQYQVDPSLF
SAQPDFLLKV RGMSMRDAGI LDGDLLAVQR ASEATNGKIV VARLGDDVTV KRFQRKGRHV
ELIAENPDFE PIHVDLDRDE FHLEGLAVGL IRPAAP
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