| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1176 |
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| Symbol | |
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| ID | 6288004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1265354 |
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| End bp | 1267084 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642624746 |
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| Product | hypothetical protein |
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| Protein accession | YP_001898752 |
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| Protein GI | 187928265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.533125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA CTGCCCGTAT TGGCCTGTCT TCGCTGACGA TCGCACTGTC GCTGGCTTGC
GGCACCGGCG CCTTTGCCGC CACGATTCAG AAACCGCAAC TCGACGCGCT GCTCGCCGCC
GAGCAATCCA AGGCATCGGC CGATCTGAAC AGCTTTCTTG CGGCAGCCGC GAAGGCCGAT
CCGCAAGTCG CGGGCAGTGT CGCCGCGTAC CAGAAGAAGG CTCCGGTGGC CGGCGATGAC
CTCGTCAACA TCGGGCGCCT GCTGGGTCTG TACAACCGCC TGCACAACCA GCAGGCCGTG
ATTGGTTCGA TCGAAAAGAT GGTCGCGCTG CCCACGGTGC GCGACGACAA GATTCCGCAG
TACGAAAACC CCGCCATCGT CGCGTTTGGC AAGCTGATCG AGGGCATGGC GCGCGATTTC
GGCTTGAAAT ACCGCAACGT CGACAACCGC GTCTTTGAAG TTACGCTGCC CGGCACCGGC
TCGGACGAGT TCGGCATCCT GACGCACGCC GACGTCGTAC CCGCCAAGGC CGAGGAGTGG
GTGCTCGGCG ACGGCACCAA GCTCGATCCG TTCAAGGTCA CGCGCGTCGG CAATCTGCTG
TACGGCCGTG GCACGATTGA CGACAAGGGC TCGATTGCCG CCGCGATGTA CGCCATGAAA
ACGGTCAAGG ACAGTGGCGT GCCGCTCGCG CGCACCATCC GCCTGATGAT CGAAACCACC
GAAGAAACCG GTGGCGATGG CATGAAGTAC TACCGTGAGC ACACGCAATT GCCTGCGTAC
AACATCGTGC TCGACAGCAA GTACCCGGCC GTGGTTGCAG AGAAAGGCTC GGGCGCATTG
AAGGTGTTCT TCCCTGCGCA AGCTGGCGAT GCTTCGCATA CGGCCATCGT TTCGATGACG
GGCGCGGCGT CGGCAAGCTC CATCCCACAA ACGGCCACCG CCACGCTCAA GGGCGGTGAT
CTGGGCCTGG CCGCCGCCGC GCTCGAAGCC AAGCGCGATG GGTTCGTGAA CAGCTTGGCA
GGGCAGGGCA AGTTCTCGAT CGACATCGCG CGCACGGGCG ACAGCATCGT CGTGAAGGTG
ACTGGCGCCT CCGCACACGG CTCGCGTCCG GAAGAGGGCG TCAACCCGCT GCCGCGCCTC
GCGCTGTTCC TGCGTGCAGC CGATCTCGGC TTGGCAGACA ACGCCTACGC TCATGCCGTG
CGCTACCTCA CCGACCTTTA CGGCACCGAC TACCTCGGCA CTACCATGGG CGTCGCCTAC
AAGGACGACT TCATGGGGCC GCTCACCATT TCGCCTACGG TGATCGGCGA CAAGAATGGC
CGCGTGGAGG TGAGCGCCAA CGTGCGCATG CCGCGCGGCA AAACGCCTGA TGCGCTGCGC
GGTGAAATCG CCGGCAAGAT CAACGCATGG GCCAAGGCCA ACCATGTCGC CCTCGAGATC
AACCACGATC AAGGCAACTG GATGGCGCGC GATCCGAAGG GCGCGTGGCT GTCGACGCTG
CTCAACATTT ATGGTGACAC CACGGGCCTC GACGCCAAGC CCGTGCCGAC GGCCGGCAGC
ACGACGGCCA AGCTGATGCC GAACGCCATC AATTTCGGCC CGGCCATGCC GGGCAAGAAG
TACACGGCGC ACAACGCCAA CGAGTACAAG GAAGTGCAGG ACCTCGACCT CGATATGCAG
ATGTTCACCG AGATGTTGGT GCGCATCGGC AACCTGCAGT CAATGCAATA A
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| Protein sequence | MQRTARIGLS SLTIALSLAC GTGAFAATIQ KPQLDALLAA EQSKASADLN SFLAAAAKAD
PQVAGSVAAY QKKAPVAGDD LVNIGRLLGL YNRLHNQQAV IGSIEKMVAL PTVRDDKIPQ
YENPAIVAFG KLIEGMARDF GLKYRNVDNR VFEVTLPGTG SDEFGILTHA DVVPAKAEEW
VLGDGTKLDP FKVTRVGNLL YGRGTIDDKG SIAAAMYAMK TVKDSGVPLA RTIRLMIETT
EETGGDGMKY YREHTQLPAY NIVLDSKYPA VVAEKGSGAL KVFFPAQAGD ASHTAIVSMT
GAASASSIPQ TATATLKGGD LGLAAAALEA KRDGFVNSLA GQGKFSIDIA RTGDSIVVKV
TGASAHGSRP EEGVNPLPRL ALFLRAADLG LADNAYAHAV RYLTDLYGTD YLGTTMGVAY
KDDFMGPLTI SPTVIGDKNG RVEVSANVRM PRGKTPDALR GEIAGKINAW AKANHVALEI
NHDQGNWMAR DPKGAWLSTL LNIYGDTTGL DAKPVPTAGS TTAKLMPNAI NFGPAMPGKK
YTAHNANEYK EVQDLDLDMQ MFTEMLVRIG NLQSMQ
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