| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1174 |
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| Symbol | |
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| ID | 6289610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1263605 |
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| End bp | 1264588 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624743 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001898750 |
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| Protein GI | 187928263 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.221555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.358553 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATT GGACTGACAG ACATTGCCGG TTCTTCCATC GCCAGATCTC GCGCCACACG
TGGCTCTACA CCGAAATGGT GACCACGGGC GCGCTGCTGC ACGGCGACGT CCCGCGCCAC
CTCGATTTTG ACGAGTTCGA GCATCCCGTG GCGCTCCAGC TCGGCGGCAG TGAACCGGAC
GATCTGGCCC AGGCCGCGCG CCTCGGCCAG CAATGGGGCT ACAAAGAAAT CAACCTCAAC
TGCGGCTGCC CGTCGGAGCG CGTGCAGCGC GGTGCGTTCG GCGCCTGCCT GATGGCTGAG
CCCAAGCTCG TCGCGCAGGG TGTCACGGCG ATGCGCGATG CGGTGTCGAT TCCGGTCACG
GTCAAGCACC GCATCGGCAT TGATGCAATC GAGACCTACG ATTTCGTGCG CGATTTCGTC
GGCACCATCG CCGAGGCGGG TTGCGAGACG TTCATCGTGC ACGCGCGCAA TGCCATCCTG
AAAGGCCTGA GCCCGAAGGA AAATCGCGAG ATTCCGCCGC TGCGCTACGA AGTCGTCTAT
CAGCTCAAGC GGGATTTCCC GCATCTGGAA ATTCTGCTCA ACGGTGGGGT GCAGACGCTC
GAGCAGATCG ACACGCACCT GGCGCACGTT GATGGCGTAA TGATCGGCCG TGAGGCGTAT
CACCATCCGC ATCTGATGGC TGCGTTCGAT GCGCGCTACT ACGGCGCAGG CACCGAGGCC
CCCACGCGCG CCGAGGTGGA AGACGCGATG ATCGGCTACG TCGGCCGCTG GGTAGAGCGT
GGCGGCTACG CAGGTGCGGC GGTGCGGCAC ATGCTGGGGC TGTATCGCGG TGTGGCGGGC
GCGCGCGGCT GGCGGCGCGT GCTGTCGGAC TCCAAGGCGC TGGGCCGCGT CAAGACGCTG
GCCGACGCCC ATGCACTGTT CGACGAGGCG CGTGCCCACC TGCGGCGTGG CGAAGAATCG
AATGAGGAGG CGGTAGCGGT TTGA
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| Protein sequence | MMDWTDRHCR FFHRQISRHT WLYTEMVTTG ALLHGDVPRH LDFDEFEHPV ALQLGGSEPD
DLAQAARLGQ QWGYKEINLN CGCPSERVQR GAFGACLMAE PKLVAQGVTA MRDAVSIPVT
VKHRIGIDAI ETYDFVRDFV GTIAEAGCET FIVHARNAIL KGLSPKENRE IPPLRYEVVY
QLKRDFPHLE ILLNGGVQTL EQIDTHLAHV DGVMIGREAY HHPHLMAAFD ARYYGAGTEA
PTRAEVEDAM IGYVGRWVER GGYAGAAVRH MLGLYRGVAG ARGWRRVLSD SKALGRVKTL
ADAHALFDEA RAHLRRGEES NEEAVAV
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