Gene Rpic_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1168 
Symbol 
ID6286416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1257380 
End bp1257751 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content65% 
IMG OID642624737 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001898744 
Protein GI187928257 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.375824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.242343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACTA TCGAAGAGAG CGCGCCAATA CGGCGCCGAC GTCGGCATAG CGCCGAGTTC 
AAGGCCAAGG CAGTGCAGGA GTGCATGCAG CCGGGTGTTT CGATCGCGGC GATAGCCCTG
CACCATCGCC TCAATGCGAA TCTGCTGCGG CGCTGGGTCG CCGAGCAGGA AGCAAAGAAT
GGCGCGCCTG AGGACCGCGA GTTGATGAGG GTGCCGCAAG GCGAGTTCAT CCCGTTGCGG
ATCGGCGAGC CGACCACTGC CGTGCCGGAC ATCCAGATCG AAGTCCGCCG TGGCGCGACG
ACGATCAGTC TTCGCTGGCC GGGATCGGCC GCAGCGCAGT GCGCCCAGTG GCTGCAAGGG
TGGTTGCGTT GA
 
Protein sequence
MDTIEESAPI RRRRRHSAEF KAKAVQECMQ PGVSIAAIAL HHRLNANLLR RWVAEQEAKN 
GAPEDRELMR VPQGEFIPLR IGEPTTAVPD IQIEVRRGAT TISLRWPGSA AAQCAQWLQG
WLR