| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1166 |
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| Symbol | |
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| ID | 6286928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1256305 |
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| End bp | 1256928 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642624736 |
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| Product | hypothetical protein |
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| Protein accession | YP_001898743 |
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| Protein GI | 187928256 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.22916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.184887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACTTTCA TCGACGCCTG TAGAGCGGCT GGCGTTCATC ACCTGATCAA GCTATCCGGA
CTGAACGCAG GACGAGAAAC GACGTTCGTG TTCAGCAACA TGCACAAGCG GATCGAAGAG
CACCTGCGAG GTAGTGGCAT GGCGTGGACG AGCCTGAGAC CCACGGGTTT CATGCAGGAG
TACATTTTTG AAGCACCGAG CATCGTTAAC GATGGCTCGC TGTATCTGGC GCTCGACAAC
ATCAAGCTGA GTCCGGTTGA TTTGATGGAC GTTGGAAAAG TTGGATTCCA GTTGCTTCGT
GATGGCGGCT ACCATGGGGA GGTGCTGCCC ATGACGGGCC CCGACCTTTT GAGCATGGCT
GACGTCGCCC AGCATTTGTC GACAGCAACG GGTCGCAAGG TACGGTATGT GCCCATCAGT
CCGCTCGAGC GTTGGCGCGC CCTGGTTGCG GCTGGTATTC CTACGGAGGT GGCCGACGCG
CTGGACAAGC AAGTCCACGA GCGGCTCCAG GGCGGGTCTG AGTCGACCAT TGAACTATCG
ACGCACAAGC GCTTCAACGT GTTGCCGACG TCTTTTAGCC AATTTGCCGA ACGGCATGCC
ATGGACTTTG GCGCAGGCCA GTAA
|
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| Protein sequence | MTFIDACRAA GVHHLIKLSG LNAGRETTFV FSNMHKRIEE HLRGSGMAWT SLRPTGFMQE
YIFEAPSIVN DGSLYLALDN IKLSPVDLMD VGKVGFQLLR DGGYHGEVLP MTGPDLLSMA
DVAQHLSTAT GRKVRYVPIS PLERWRALVA AGIPTEVADA LDKQVHERLQ GGSESTIELS
THKRFNVLPT SFSQFAERHA MDFGAGQ
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