| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1163 |
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| Symbol | |
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| ID | 6286323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1250816 |
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| End bp | 1252831 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624733 |
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| Product | Capsule polysaccharide biosynthesis protein |
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| Protein accession | YP_001898740 |
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| Protein GI | 187928253 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0373646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.786795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACA TGGGCGCGGT TGCCGGGCCT GTGCCTCAGG TCGCCTCATA CCTGCGTGGC
GTGACGCGGG GCTGGCGCAC GCTTGGCTCC ATCGCGGGCG TTGCCGGTGG TGTATGGGGC
GAGCGGCGGG TGGGGCGGGC AGTGCTCCGG CTCAAACGCT GCATTGATTC GACCACACCG
ACTTTGCTTC CAGGTCCGAT CTGGTCGGAA TGCAAGCTCG GGGAGCCGAT GCTGTCTTGG
TTCGTGCTGC CCGGGCCAGG TGGCGCGGGT GATCCGATGG AACAGGCCGT GCAGGGATTG
CTTGCCAGCG TCGATAGCCT GGGGACCTCG CCGGAACTGC CTGACCTTAT GGCGCGCATG
GTCGCCGCCC GTGCGGACCT TGCACGCAAT GCCACGCCTG TTTGTCCACC GGAGTTAATG
CAGCCGCATA GTAAGCCGCG CGTGTTACTG ATTGACCAGC AATGCGGTTG GGGCGCAACG
AGGGCCGCGT TTGCGCGCAT GGTGGCGGCG GCACAGAGCG AGCACCCCGG CGCAGAAATC
TGGATCTGGC CCGCTGCCCG TGGCGCTGCG GGCGGGCTGT CCGGAGCGGG TGATCTGCCT
ACAGGCACGC GCAGAATTGC TGCGGGTTTC AGTTTTTTCG CCACGCTGTC ACATATTGAC
CATACATATA CGGTGAGCGC GCCCGAAGGC ATGCAGGCTC TGTTGGCTGG CATACCTGTG
CGCGTGTTTG GTCGCCCATA CTATGCGGGC TGGGGCCTGA CAACGGATGA TCTTCCGATG
CCGGACCGCC CCCACCGCCC CACACTCGCC GCATTGTTCG ACGCGGTCTA TCTGCGACTC
GCGCGCTATC TTGACCCCGA AACCCATGGT GTTGGCACGC TGGAACGCTC GCTTGACAGC
ATTGAGCTGC AGCGCACGGT GCGTGCGCGC TATGCAGATT GCGAGCGAGT GGCGGGGGTG
CGTTTCCAGC TATGGAAGCG GTTTTTCGCC ACACCATTCC TGATGGCTGG CGGGAGCAAA
TTGCGCTGGG CGCGCGTGTC AGAAAAGATA GAGCACGGGG AGCGTGTGGC GCTGTGGGGG
GGCAAGAGCA CGGAGGGCAT TCCAGCGAGT GCACCCATGT TGCGCATGGA AGATGGTTTC
TTCCACTCCG ACGGACTTGG CTCCGACATG AATGCGCCGT GCAGCCAGGT GCTCGATCGG
GAGGGGCTGT ATTTCGATGC GCGCACCCCG AACGAACTGA CGCATACCCT GAACAGCGCG
CAATTCGATG ATGCGGAACT TGCTCGAGCG GCGGCTTTGC GTGAGTTGAT AGCTCGCCTT
GGCGTCACGA AGTACAACCT CGGCCGGCGC GCGCCGGGCT GGAACGCACC GGCCGGCAAG
ACGGTCATCC TCGTGGCTGG CCAGGTGGCC GACGATGCGT CGATCCGCTT CGGCACCGGG
GCACTCGGCA CGGCTGAAGC GCTGCTCGAA GCGGTGCGCA AGCGCAATCC AGATGGCTTC
ATCGTCTACA AGCCGCATCC AGATGTGTTG TCCGGCAACC GGCAGGGGCT GGTGCATGCC
CACGAATTGG CCGACATTGT CGACGCCGAG TCCGACGTGG TCTCGTTGGT CGATTGCGCC
GATGAGGTGC ACGTGCTGTC ATCGCTCGTT GGATTTGATG CTCTGCTGCG AGGCAAGCGC
GTCTTCACCT ATGGGTTGCC GTTCTATGCA GGCTGGGGGC TGACACAAGA TGCGCTGGAG
CAGCCGTGGC GGCAGCGCAA GCTGACGCTC GACATGCTGG TGGCTGGTGC GTTGCTGCGC
TACCCAATCT ATTGGGACTG GCGCACCCGG CTGTTCACCA CGCCGGAAGC GGTGGTGCGC
AAGCTCGGAT CAACGGCAGC ACGCCCGCTT GGGCGGATTG CGGATGACTG GAAGCGGCCG
CTGCGCAAGG CGTGGCGCTG GAGCCGGAAT GCGGCGTGGT ACGGATATTG GGCCTGGGCG
CAACGTCGGC AGGCGCGCCT GCGTGGAGTG CTGTAG
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| Protein sequence | MRDMGAVAGP VPQVASYLRG VTRGWRTLGS IAGVAGGVWG ERRVGRAVLR LKRCIDSTTP
TLLPGPIWSE CKLGEPMLSW FVLPGPGGAG DPMEQAVQGL LASVDSLGTS PELPDLMARM
VAARADLARN ATPVCPPELM QPHSKPRVLL IDQQCGWGAT RAAFARMVAA AQSEHPGAEI
WIWPAARGAA GGLSGAGDLP TGTRRIAAGF SFFATLSHID HTYTVSAPEG MQALLAGIPV
RVFGRPYYAG WGLTTDDLPM PDRPHRPTLA ALFDAVYLRL ARYLDPETHG VGTLERSLDS
IELQRTVRAR YADCERVAGV RFQLWKRFFA TPFLMAGGSK LRWARVSEKI EHGERVALWG
GKSTEGIPAS APMLRMEDGF FHSDGLGSDM NAPCSQVLDR EGLYFDARTP NELTHTLNSA
QFDDAELARA AALRELIARL GVTKYNLGRR APGWNAPAGK TVILVAGQVA DDASIRFGTG
ALGTAEALLE AVRKRNPDGF IVYKPHPDVL SGNRQGLVHA HELADIVDAE SDVVSLVDCA
DEVHVLSSLV GFDALLRGKR VFTYGLPFYA GWGLTQDALE QPWRQRKLTL DMLVAGALLR
YPIYWDWRTR LFTTPEAVVR KLGSTAARPL GRIADDWKRP LRKAWRWSRN AAWYGYWAWA
QRRQARLRGV L
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