| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1157 |
|---|
| Symbol | |
|---|
| ID | 6288756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1239167 |
|---|
| End bp | 1240060 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642624727 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001898734 |
|---|
| Protein GI | 187928247 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.109376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG TCCTGATTAC CGGCATTCGC GGCTTCACCG GGCAGCACTT GCTCAAGGAG
TTGCTTGATG CCGGTCACGA AGTCTGCGGC CTGGCACACA CACCGGCGCC CGAGGCGTCG
GTGCGTGTGC ATGTGTGCGA CCTGCTTGAC CGCACGGCAC TGACGGAGGT GCTCGCCCGA
GAGCAGCCCG AGGCGGTGGT GCACCTCGCC GCCATTGCGT TTGTTGCCCA TGGCGACGCC
CGGGCAATCT ACGAGACCAA TGTGGTGGGC ACCCGCAATC TGCTGGATGC TATCCATACG
TCGGGCTGTC GGCCAAAGTC CGTACTGCTG GCCAGCAGCG CCAACATCTA CGGCAATGCA
GACCGCGAGG TGATTGACGA GTCCACTCCC GCTGCGCCTG CCAATGACTA CGCGGTCAGC
AAGCTGGCCA TGGAATACAT GGCCAGGCTG TGGGAAGACA AGCTGCCAAT CACCATCGTG
AGGCCGTTCA ACTACACAGG GGTAGGACAG TCGCCCAACT TCCTGCTGCC GAAGATCGTC
TCGCACTTCC GCGAGCGCAA GCCTGTCCTA GAACTGGGGA ATCTGCACGT CGTCCGCGAT
TTCTCCGATG TGCGCAGCGT TGTGTCCGCC TATGGGCGCT TGCTCGACGA GCAATTCGCG
GGCCAGACCT TCAATGTCTG TTCGGGTACT GGCTATGCGT TGGAGGATGT GCTGGCCATG
ATGTGCGATC TCGCCGGATA CCAGCCGGAG ATCAAGGTGA ACATGGCCTT TGTACGCGCC
AACGAAGTGC ACACGCTGAT CGGTAGCAAC GCCAAGTTGC GTGAGGCCAT TGGCGCGCAG
CCCACCATTG CGTTGCGCGA CACACTGCAG TGGATGCTGG AAGCCGAAGA ATGA
|
|---|
| Protein sequence | MAKVLITGIR GFTGQHLLKE LLDAGHEVCG LAHTPAPEAS VRVHVCDLLD RTALTEVLAR
EQPEAVVHLA AIAFVAHGDA RAIYETNVVG TRNLLDAIHT SGCRPKSVLL ASSANIYGNA
DREVIDESTP AAPANDYAVS KLAMEYMARL WEDKLPITIV RPFNYTGVGQ SPNFLLPKIV
SHFRERKPVL ELGNLHVVRD FSDVRSVVSA YGRLLDEQFA GQTFNVCSGT GYALEDVLAM
MCDLAGYQPE IKVNMAFVRA NEVHTLIGSN AKLREAIGAQ PTIALRDTLQ WMLEAEE
|
|---|
| |