Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1131 |
Symbol | |
ID | 6289373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1209039 |
End bp | 1210283 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642624703 |
Product | 3-hydroxyisobutyryl-CoA hydrolase |
Protein accession | YP_001898710 |
Protein GI | 187928223 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.663045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.545416 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGTCG TCTCCAACTG GCAGGTATAC GCCCAACACC CGCGCTGCGA AAGGGGGCAG GCTAGAGCCC TTCCTCGCTT CAATACGCTG TCGTGTACAG TGCGAGCCGT TATTACCCAC AACAACATTC GAGACATGCA ATCCACCGCT TCCCCCGCGC CCCAGGCTGA AGTTCAACCC AACGTGATCG CCGAAGTACG CGGCGGCATC GGCTGGCTGA CGCTGAACCG GCCGCAGGCG CTCAACGCGC TGTCGCTGGA GATGATTCGC GCCATGTCGC ATGCGCTGCT GGCGTGGCAG CACGATCCGG AAGTCCACGC TGTCATCCTG CGTGGCGAGG GCGGCAAAGC CCTGTGCGCG GGCGGCGATA TCCGTTTCTT CTACCGCGCG GCCACGGCAG GCGACCCGCA GCTCATCACC TTTTTCACCG AGGAGTACCG CCTCAACCAC CTCATCTTCA GCTATGCCAA GCCCTACATC GCGCTGATGG ACGGCGTCGT CATGGGCGGT GGCATGGGCA TCTCGCAAGG CGCATCGCTG CGCGTGGTGA CCGAACGCAC GAAGATGGCC ATGCCCGAAA CCAACATCGG CCTGTTTCCG GACGTGGGCG GCGGGTGGTT CCTGGCGCGC GTGCCGGGTC ATGTGGGCGA ATACCTGGGC GTGACCGGCC AGATGATCGA AGCGGCGGAT GCGTTGTCGA TCGGCCTTGC CGATTGCCAT GTCACCACCG CGGCGCTGGC GTCCATCTTC CAGCGCCTGC GCGACGGCAA CTGGGGCAGC GCCGAGCAGA TCACCGCCTG CTTTACCGAA GCCGCATCGG CGCCCGATGA TGCCAAGGCC ATCATCGCCC TTCACCGCGA GACCATTGAT GCCTGCTTCA GCCAAAGCAG CGTGCAAGGC ATCTTCGCGG ATCTGGCCGG CAGCACGGAT ACCGAATGGG CCGCTCAGAC CGCCGCGCAC ATGGCCAAGC GCTCGCCGTT GATGATCGCG GTGACGCTTG AGTTGATCCG CCGCGGCCGC CACACCACGT TGGCCGATGA GCTGCGCCGC GAACTGGACA TGATGACGCA CGTGTTTGCC GAAGGCGATG GCATCGAAGG CATTCGGGCC CTCGCGGTCG ACAAGGATCA TGCGCCCAAG TGGAAGCACG CCAGCATTGA CGCCGTGCGT GACGACGAAG TGGCCGCCTT CTTTGTTTCG CCTTGGCGCC ATGAGCAGCA TCCGCTGCTG GGGCTGTCGG ACTAG
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Protein sequence | MCVVSNWQVY AQHPRCERGQ ARALPRFNTL SCTVRAVITH NNIRDMQSTA SPAPQAEVQP NVIAEVRGGI GWLTLNRPQA LNALSLEMIR AMSHALLAWQ HDPEVHAVIL RGEGGKALCA GGDIRFFYRA ATAGDPQLIT FFTEEYRLNH LIFSYAKPYI ALMDGVVMGG GMGISQGASL RVVTERTKMA MPETNIGLFP DVGGGWFLAR VPGHVGEYLG VTGQMIEAAD ALSIGLADCH VTTAALASIF QRLRDGNWGS AEQITACFTE AASAPDDAKA IIALHRETID ACFSQSSVQG IFADLAGSTD TEWAAQTAAH MAKRSPLMIA VTLELIRRGR HTTLADELRR ELDMMTHVFA EGDGIEGIRA LAVDKDHAPK WKHASIDAVR DDEVAAFFVS PWRHEQHPLL GLSD
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