| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1129 |
|---|
| Symbol | |
|---|
| ID | 6289371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1207259 |
|---|
| End bp | 1208128 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642624701 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001898708 |
|---|
| Protein GI | 187928221 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.412971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.826624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAATC TGGACATCGA TCTGCTGCGC ACCTTCGTGG CGATCGCTCA GCACGAAACG
TTTGCCGCGG CAGCAGCACG GGTGGGGCGC ACGCAGTCGG CGGTTACGCA GCAGATGCAG
CGGTTGGAGG AGGAAATGGG CTGCGCGCTG TTCGAAAAGC GCGGCCGCCA CAAGATGATG
ACGCCCGATG GCGTGCGGCT CGTCGCCTAT GCGCACAAGA TCCTGGCGCT CAACGACCAG
GCCGTGCAGG TGATCCAAAC TGGTGGGCCG ATCGAGAAAA TCCGCATCGG CTCACCGCAC
GATGTGGCCG ATTCGATCCT GCCGAATCTG CTGCGGCGGT TGTCCAAGCT GTCGCCGGAA
TTGCAGATGG AAATCAACGT GGGCCGCAGC CCGTTCCTGA TGGACGCGTT GCGCGACAAG
ACGCTCGATC TGGCGATCTC GACACGCTAT GACGATGCCT TTCCCGGCAT CAAGCTGCGC
ACGTCGCCGA TGGTGTGGAT CTGCGCGGAA GACTTCATCT TCAATCCCGC CGCGCCGGTG
CCACTGGTCA TGGCCGACGA GCTGAGCCTG TTCCGCCAAT TGTCGATCGA ATGCCTGGAT
GCCCACCACA TTCCGTGGCG CACGAGCTAT CTGTCGCCCA CGCTGACGGG CATCAAGGCC
GCGATCAGCG CGGGGCTCGG CGTGACCGCG CGCACGACCG AATTGCTCGA TGCCAACATG
CGTGTGCTGA CCGAGGCCGA TGGTCTGCCG CGTCTGCCCG AGGTAGCGTT CTACCTGTAC
GTGCAGCCGA CGTGCACGAG TGCCGTGCTG CGCGATCTGT TCGATTCCAC CGATCGCGTC
GCCACGCGCT TCGGGCCGCC GTTCATGTGA
|
|---|
| Protein sequence | MRNLDIDLLR TFVAIAQHET FAAAAARVGR TQSAVTQQMQ RLEEEMGCAL FEKRGRHKMM
TPDGVRLVAY AHKILALNDQ AVQVIQTGGP IEKIRIGSPH DVADSILPNL LRRLSKLSPE
LQMEINVGRS PFLMDALRDK TLDLAISTRY DDAFPGIKLR TSPMVWICAE DFIFNPAAPV
PLVMADELSL FRQLSIECLD AHHIPWRTSY LSPTLTGIKA AISAGLGVTA RTTELLDANM
RVLTEADGLP RLPEVAFYLY VQPTCTSAVL RDLFDSTDRV ATRFGPPFM
|
|---|
| |