Gene Rpic_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1128 
Symbol 
ID6289370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1205413 
End bp1207002 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content66% 
IMG OID642624700 
ProductRhodanese domain protein 
Protein accessionYP_001898707 
Protein GI187928220 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.921716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGT TCGTTACCGC CCAGGCCCTG AAAGCGTGGC TGCACGACGG CGCCGAGATC 
GCGCTGTTCG ACGTGCGCGA GCACGGCCAG TATGGCGAAG CCCATCCCTT CTACGCCATC
CCGCTGCCGT ACAGCCGACT TGAGATCGAT GCCCCGCGCC TTGCGCCACG CCGCGCGGTT
CGCATGGTCG TTTATGACGA CAACGATGGC GTTGCCGATC GCGCGGCCGA TCGCCTGAAC
ACCATCGGCT ACACCAACGT GCACGTACTG CAAGGCGGCG CACAAGCTTG GGCGCAGGCA
GGCTTTACGC TGTTTGCCGG CGTTAACGTG CCGTCCAAAA CCTTCGGAGA ACTCGTCGAG
AGGGCGTACC ACACGCCGCG CGTCACCGCG CGTGAACTTG CGGCCATGCG TGAACGCGGC
GACGACGTCG TCATCGTCGA TGGCCGCCCC GTCAGCGAAT ATCTGAAGAT GACGATCCCG
TCGTCGATCT GCTGCCCGAA CGGCGAACTG GGGCTGCGCA TCCGCGAGCT TGTCCCCGAT
GCAACCACGC CAATCGTCGT CAACTGCGCG GGCCGCACGC GCAGCATCAT CGGTGCGCAG
ACGCTGATCA ACCTCGGCAT CCCGAACCCC GTGATGGCGC TGGAGAACGG CACGCAAGGC
TGGTATCTGG AAGACCTTCC ACTGGAACAC GGCAGCACCC GCCGCTATCC CGATGTCATT
GCGCCCGCTA ACGTCAAGGA CATGCGCGAG GCCAGTCAGC AACTTGCCGC GCGCTCTGCC
GTGCCCGAGG TGGATGCGGC AACGCTCGCA CGCTGGGTCG CACAAGGCGA ACAGAGCCTC
TACCTGTGCG ATGTCCGCAC ACCTGAGGAA TTCGCCTCTG GCAGCTTACA AGGCGCGCAG
CATGCGCCGG GCGGTCAGTT GATCCAGGCA ACTGATCAGT ACGTCGGCGT GCGCCACGCG
CGGCTCGTGC TGTTCGATGC CGACGGCGTC CGCGCGCCAA TCGTTGCCAG CTGGCTGCGG
CAACTTGGTC ACGATGCCTA TGTGCTGCGC GACGGCCTGG ACAGCCGCGC GAGCCTGCCG
GTGGCCATGA CAGTGTTGCC GCAGCCGTTG CCCGAGTTCA GCGTGCAAGC ACTCGCCACT
GCGCTCGCGG CCGGCACCGC ACATGTGATC GACCTGCGCC CCAGCATGAG CTTTCGCCGC
GCCCACGTGC CTGGTGCCAC ATGGGCCATT CGTCCACGCT TGCCGGCCCT GGCCGCCGAC
CGCGATACCG TCCTGATCGC CGACGACCCG CGTATCGCTC AGCTCGCCGC GGCAGATTGG
GCAGCACACG CGCCGCAAGC CGCGTCGCGT CTCAAGTTGC TGGCCGGTGG CATCACCGCG
TGGACTGCCG CCGGCTACGC CACCGAAGGT TCCGACAGCG CACCGCCTGA CGCCGATTGC
ATCGACTATC TCTTCTTCGT GCATGATCGG CATGACGGTA ATAAGGCTGC GGCAAGGCAA
TACCTGGCCT GGGAAACCGG CCTGCTCGCT CAGCTCGACG CGCAGGAACT CGGCGCCTTT
CGCGTCGGTG CGGGTGGCGC GCAGTCATGA
 
Protein sequence
MTSFVTAQAL KAWLHDGAEI ALFDVREHGQ YGEAHPFYAI PLPYSRLEID APRLAPRRAV 
RMVVYDDNDG VADRAADRLN TIGYTNVHVL QGGAQAWAQA GFTLFAGVNV PSKTFGELVE
RAYHTPRVTA RELAAMRERG DDVVIVDGRP VSEYLKMTIP SSICCPNGEL GLRIRELVPD
ATTPIVVNCA GRTRSIIGAQ TLINLGIPNP VMALENGTQG WYLEDLPLEH GSTRRYPDVI
APANVKDMRE ASQQLAARSA VPEVDAATLA RWVAQGEQSL YLCDVRTPEE FASGSLQGAQ
HAPGGQLIQA TDQYVGVRHA RLVLFDADGV RAPIVASWLR QLGHDAYVLR DGLDSRASLP
VAMTVLPQPL PEFSVQALAT ALAAGTAHVI DLRPSMSFRR AHVPGATWAI RPRLPALAAD
RDTVLIADDP RIAQLAAADW AAHAPQAASR LKLLAGGITA WTAAGYATEG SDSAPPDADC
IDYLFFVHDR HDGNKAAARQ YLAWETGLLA QLDAQELGAF RVGAGGAQS