Gene Rpic_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1125 
Symbol 
ID6287646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1202509 
End bp1203027 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID642624698 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001898705 
Protein GI187928218 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.416342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC AGACAAGACC CGCCACCGAA GTTGCTGCCG GAACGCTCTT CCGGGTGGAG 
GACTACCGCA TGTGCGAAAG CGTTGGCTAC CTCGTCGGGC GCGCCAAGAC AGCGCTGTCC
ATGGCCATCG AGCAGGAAGT TGCCGCGATG GACGTGACCC ATTCCCAGGC TAGTTGCCTA
GTGCTGCTCG CTAACGGCCG ATGCCAGACC GCGACCGACC TCGGCCGCGA ACTGAACACC
GACATCGGTT CGCTTACACG CATGCTCAGC CGCATGGAAA AGCGCGGCTT GATCGAGCGC
GTGCGCAGCG AATCCGACCG CCGCGTCGTG CATCTGGAGG TGACCGAAGC CGGCCGGGAC
TTGGCCGACC GCATGCCGGC CATCTATACG CACGTGCTGA ACCGTTTCTT TGCCGGCTTC
ACGCCGGGCG ACGTCGATAC GCTGCGCGGA CTTCTCAAGC GCATTCTCGA CAACGGTGCC
GCCACGGAGG GCCACCGCAT GCGCCCCGCC GATCACTGA
 
Protein sequence
MSEQTRPATE VAAGTLFRVE DYRMCESVGY LVGRAKTALS MAIEQEVAAM DVTHSQASCL 
VLLANGRCQT ATDLGRELNT DIGSLTRMLS RMEKRGLIER VRSESDRRVV HLEVTEAGRD
LADRMPAIYT HVLNRFFAGF TPGDVDTLRG LLKRILDNGA ATEGHRMRPA DH