| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1116 |
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| Symbol | nusA |
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| ID | 6286978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1190719 |
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| End bp | 1192194 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642624689 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001898696 |
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| Protein GI | 187928209 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.749384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG AAGTTCTGTT GCTCGTCGAT GCGCTTGCGC GCGAAAAAAA CGTCGACAAG
GATGTGGTGT TCGGGGCGCT GGAGGCCGCA TTGGCTTCGG CGACCAAGAA GCGCTTTGAA
GAAGACGTGG ATGTGCGCGT GGCGATCGAC CGTGAGTCGG GCGAACACGA AACCTTCCGT
CGCTGGCTCG TCGTTCCCGA CGATGCAGGC CTGCAGGAGC CGGACAAGCA GATTCTGCTG
TTTGAAGCCA AGGAGCAGGA CGCTGACATC GAGGTCGACG ATTTCGTCGA AGAGCAGATC
GAATCGGTCG AGTTTGGCCG CATCGGCGCG CAGGCTGCCA AGCAGGTGAT CCTGCAGCGC
ATCCGCGATG CCGAGCGCGA GCAGATCCTG AACGACTACC TGGATCGTGG CGAGAAGGTC
ATGACCGGCA CGATCAAGCG CGCCGACAAG AAGGGCCTGA TCGTAGAAAC CGGTCGCGTC
GAGGCGCTGC TGGCCCGCGA CCAGATGATC CCGAAGGAAA ATCTGCGCAC GGGCGACCGT
GTCCGCGCGT ACATCCTGAA TGTCGACCGT ACCGCACGTG GCCCGCAGAT CGAGCTTTCG
CGCACCTGCC CCGAGTTCCT GATCAAGCTC TTCGAAAACG AAGTGCCGGA AATGGAACAG
GGCCTGCTGG AGATCAAGGC CGCCGCGCGC GATCCGGGCG TGCGTGCGAA AATCGCGGTC
GTTGCACATG ACAAGCGCAT CGACCCGATT GGCACTTGCG TCGGCGTGCG CGGCACCCGT
GTGACCGCCG TGCGTAACGA AGTTGGTGGC GAAGCTGTAG ACATCGTGCT GTGGTCGGAA
GACCCGGCGC AGTTTGTGAT TGGTGCGCTG GCGCCGGCAC AAGTGCAGTC CATCGTCGTG
GACGAGGAAA AGCACAGCAT GGACGTGGTG GTCGACGAGG AAAATCTCGC CGTGGCCATC
GGCCGTAGCG GCCAGAACGT TCGCCTGGCG TCGGAATTGA CCGGCTGGCA GATCAACATC
ATGACGCCGG CAGAGTCTGC GCAAAAGCAG GCGGAAGAAA GCTCCGTCGT TCGCCAGTTG
TTCATGGCGA AGCTGGACGT GGACGAAGAG GTTGCCGACA TCCTGATCGA GGAGGGCTTC
AGCTCGCTCG AGGAAGTGGC CTACGTGCCG CTGCAGGAAA TGCTGGAAAT CGAAGCGTTC
GACGAAGACA CCGTCAATGA GCTGCGTAAC CGCGCTCGAG ACGTGTTGTT GACGATGGAG
CTGGCGAAGG AAGAAAGGGT CGAGAAGGTG TCGCAAGACC TGCGCGACCT CGAGGGGCTG
ACCCCGGAGC TGATCGGCAA GCTGGCCGAG GGGAACATCC AGACGCGCGA CGACTTGGCC
GAGCTGGCCG TGGACGAATT GGTCGAGATG ACCGGCGTCG ACGAAGAACA AGCCAAGGCG
CTGATCATGA AGGCGCGTGA ACACTGGTTT TCGTGA
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| Protein sequence | MSREVLLLVD ALAREKNVDK DVVFGALEAA LASATKKRFE EDVDVRVAID RESGEHETFR
RWLVVPDDAG LQEPDKQILL FEAKEQDADI EVDDFVEEQI ESVEFGRIGA QAAKQVILQR
IRDAEREQIL NDYLDRGEKV MTGTIKRADK KGLIVETGRV EALLARDQMI PKENLRTGDR
VRAYILNVDR TARGPQIELS RTCPEFLIKL FENEVPEMEQ GLLEIKAAAR DPGVRAKIAV
VAHDKRIDPI GTCVGVRGTR VTAVRNEVGG EAVDIVLWSE DPAQFVIGAL APAQVQSIVV
DEEKHSMDVV VDEENLAVAI GRSGQNVRLA SELTGWQINI MTPAESAQKQ AEESSVVRQL
FMAKLDVDEE VADILIEEGF SSLEEVAYVP LQEMLEIEAF DEDTVNELRN RARDVLLTME
LAKEERVEKV SQDLRDLEGL TPELIGKLAE GNIQTRDDLA ELAVDELVEM TGVDEEQAKA
LIMKAREHWF S
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