Gene Rpic_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1115 
Symbol 
ID6288777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1190234 
End bp1190722 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID642624688 
Producthypothetical protein 
Protein accessionYP_001898695 
Protein GI187928208 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.473183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.794169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCTGA CTGATCTGAT TGAGAAAACC CTCACCGCCA TGGGGTACGA GCTGGTGGAA 
GTGGAGCGCG CGCCTGCCGG GCTGCTGCGC GTGTATATCG ATCAGGCAGA GAACGGCGTC
GTCATTGAAG ATTGCGAAAA AGTGAGTCAT CAACTCACGC GCGTGTTCGA AGTTGAAAAC
GTCAACTACG AACGGCTGGA AGTGTCGTCG CCTGGGCTGG ACCGCCCGCT ACGCACGCTG
GCCGACTTCA CGCGCTTCGC CGGCCTTGAG GCCAAGGTGA CGCTGCGCTT GCCGGTGGAT
GGACAGAAGA ATTTCACGGG AATCATTCAG GCTCCGACGG GCGAGCCAGG CCAGGAACGG
ATCGGCCTTG AGTTTGAGGG CAAGGAAGGC CCTGCGCTGC TGGGATTCAC GCTGTCGGAA
CTCGACCGCG CCCGGCTGGT GCCCGTGCTG GACTTCAAAG GAAATCGAAA CAAAGGGAAC
AAGCAATGA
 
Protein sequence
MHLTDLIEKT LTAMGYELVE VERAPAGLLR VYIDQAENGV VIEDCEKVSH QLTRVFEVEN 
VNYERLEVSS PGLDRPLRTL ADFTRFAGLE AKVTLRLPVD GQKNFTGIIQ APTGEPGQER
IGLEFEGKEG PALLGFTLSE LDRARLVPVL DFKGNRNKGN KQ