Gene Rpic_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1113 
Symbol 
ID6288775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1187310 
End bp1188152 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID642624686 
Productsegregation and condensation protein B 
Protein accessionYP_001898693 
Protein GI187928206 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.411442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.867542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC AAGAGGCGAA GATCGTCCTC GAAACCGCGC TGATCTGCGC GCAGGACCCG 
TTGCGAGTCA ATGACTTGCG CAAGCTGTTC GACGAAGATG TTTCCGCAGA CACCATTCGT
GTGCTGCTCG AAGAGCTGCG CCAGGACTGG CTGAATCGCG GTGTCGAACT GGTTGCACTG
GCCTCCGGCT GGCGCCTGCA GAGCCGCCCC GAGATGCGTG TGTATCTCGA CCGCCTGCAC
CCGGAAAAAC CACCCAAGTA CTCGCGCGCG GTGATGGAGA CACTTGCGAT CATCGCTTAC
CGCCAGCCGG TCACGCGCGG CGATATCGAA GACATTCGCG GTGTTACGGT CAACACGCAG
GTCATCAAGC AGATTGAAGA CCGCGGCTGG ATCGAAGTCA TCGGTCATCG CGACGTGCCT
GGTCGCCCTG CGCTGTATGC GACGACCAAG CAGTTTCTCG ATGACCTTGG CTTGCGCTCG
CTGGACGAGC TGCCGCCGCT CGAAGATGCC CGCGCCCAGG CGCAGGCCAG CCTGCTGGAG
CAGGGCGCCA TTGAGTTCGA GGGCGGCGCA ATTGCGGTGG AAGAGCTGAC AGCGTTGGTC
AACGACGCGC CGGAGGGCGC GGAAAGCGCA GCGGCTTCGG TGGAGGAACC GGCCGGATCG
CCGGTTGCCG AGGCTTCCGT TGTGGTGGCC GGTGAAACGC CGGCGCAGCC TGAGATCGCG
CCGCGCGAGG AACCGGCCCT GGAAACCGAG GCGCAAGCGG TGAGTGCGAC CGAGGTTGCG
TCAGGGCCTG AACACAAAAC ACCGGTCGAG TTGCCAGCAG CTCCCGCCAA TGAACATTCG
TAA
 
Protein sequence
MNTQEAKIVL ETALICAQDP LRVNDLRKLF DEDVSADTIR VLLEELRQDW LNRGVELVAL 
ASGWRLQSRP EMRVYLDRLH PEKPPKYSRA VMETLAIIAY RQPVTRGDIE DIRGVTVNTQ
VIKQIEDRGW IEVIGHRDVP GRPALYATTK QFLDDLGLRS LDELPPLEDA RAQAQASLLE
QGAIEFEGGA IAVEELTALV NDAPEGAESA AASVEEPAGS PVAEASVVVA GETPAQPEIA
PREEPALETE AQAVSATEVA SGPEHKTPVE LPAAPANEHS