| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1105 |
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| Symbol | |
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| ID | 6287110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1181382 |
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| End bp | 1182065 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642624678 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_001898685 |
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| Protein GI | 187928198 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.13009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAACC AATCCAACAA GTTTTTCTCG CACGAGACGC TGGAAAAGAA CATCGGCTTG
CTGATTGTGA TGACGCTCGT CGTCGTCAGC ATTGCGGGCC TGGTGCAGAT TTTGCCGCTC
TTCTTCCAGC ATTCGACCAC TGAACCGGTC AAGGGCATCG CCCCGTATTC GCCGCTGCGG
CTGGCGGGGC GCGACATCTA CATTCGCGAA GGCTGTGTCG GCTGCCACTC GCAGCAAGTG
CGTACGCTGC GCGCCGAGAC CGAGCGCTAT GGCCACTACT CGCTGGCCGG CGAGTCGGTG
TTCGATCACC CGTTCCTGTG GGGTTCCAAG CGTACGGGCC CGGATCTGGC GCGCGTGGGA
CAACGCTACT CCGATGATTG GCATCGCATC CACTTGCGCG ATCCGCGGGA GGTGGTGCCC
GAGTCGAACA TGCCGTCGTA TGCGTGGCTC TCGAAGACGC CGCTGGACAA CAGCGACATC
GAAAAGAAGA TGCACGTCCT GCGTCAGCTG GGTGTGCCGT ATACGGATGC CCAGATCGCC
GGTGCGCGCG AGCAACTCGC AGGCAAAACG GAAGAAGACG CCGTGGTCGC TTATCTGCAA
GGCCTTGGCG TTGAGTTGCG TAACGTCCGG GACGTGGCTG TCGCTCCGGC TGCTGCGCCT
GCCACTGTTG CTGCCAAGGA GTAA
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| Protein sequence | MSNQSNKFFS HETLEKNIGL LIVMTLVVVS IAGLVQILPL FFQHSTTEPV KGIAPYSPLR
LAGRDIYIRE GCVGCHSQQV RTLRAETERY GHYSLAGESV FDHPFLWGSK RTGPDLARVG
QRYSDDWHRI HLRDPREVVP ESNMPSYAWL SKTPLDNSDI EKKMHVLRQL GVPYTDAQIA
GAREQLAGKT EEDAVVAYLQ GLGVELRNVR DVAVAPAAAP ATVAAKE
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